dbscATAC: a resource of single-cell super-enhancers/enhancers and gene markers derived from scATAC-seq data

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dbscATAC utilized a set of improved machine learning algorithms to identify super-enhancers and gene markers in hundreds of thousands of single cells. 155,942 super-enhancers, 288,480 marker genes, 11,900,573 enhancers and 8,986,510 enhancer-gene interactions from 1,381,777 single cells across 881 tissue/cell types in 13 species were identified. The information of all individual datasets in each tissue/cell type was also attached.

※Single-cell super-enhancers:


Mus musculus:
EC_I_Heart Collision_Brain Inh_neur HPC_Lung Enterocyte_Large
Cardiomyocyte Neur_Lamp5 L5_PT Lung L4
L5_IT EC_II_Heart Endothelial_I_Glomer B_cell_Small ExNeuron_Brain_CPN
Spleen DC_Spleen Astro_10X Collision_Spleen EC_II_Liver
Sst Astro_Cerebellum Aorta_HFD_III B_cell_Large Podocyte
Aorta_V Aorta_HFD_IX thymocyte_DP_WT_1 Microglia_PFC thymocyte_DP_KO_1
T_Reg_Spleen ExNeuron_PFC_ScPN Oligo_PFC Cerebellum thymocyte_DP_WT_2
NK_cell_Lung DC_Lung T_Reg_Thymus EC_II_Brain Oligo
B_cell_BM thymocyte_DP_KO_2 Erythrob_BM Aorta_I Aorta_VII
Oligo_Cerebellum EC_II_Lung Aorta_HFD_II ExNeuron_PFC_CThPN Pneumocyte_I
.. Astro_Brain EC_I_Lung Mono_BM Aorta_HFD_VI
Collision_Cerebellum B_cell_Lung GrC_Cerebellum Aorta_III Tubule_Distal
BoneMarrow B_cell_Spleen Brain . Pvalb
Aorta_HFD_VII Astro_PFC Purkinje_Cerebellum Aorta_HFD_X T_cell_Lung
Aorta_IV Tubule_Proxi Kidney Enterocyte_Small ExNeuron_ScPN
Testes Aorta_IX Purkinje_Brain HPC_BM Interneur_SOM
Aorta_HFD_IV Macrophage_BM SmallIntestine PFC Aorta_VI
Aorta_HFD_I Pneumocyte_II Hepatocyte Macrophage_Brain EC_I_Liver
Aorta_II B_cell_Active_Lung Collision_BM DC_BM Vip
Sperm Liver Oligo_Brain L6_IT Thymus
Mono_Lung B_cell_Active_Spleen Loop_henle B_Immature_BM GrC_Brain
Tubule_Distal_CD Macrophage_Alveolar ExNeuron_PFC_CPN Aorta_HFD_VIII T_Reg_Lung
T_cell_Spleen T_cell_Thymus LargeIntestine L6b Collision_PFC
Interneur_PFC Heart Inh_neur_PFC Tubule_Proxi_S3 ExNeuron_Brain_CThPN
Inh_neur_Cerebellum Aorta_HFD_V Macrophage_Heart Microglia_Brain Duct_Collecting
T_cell_Large Aorta_VIII

Drosophila melanogaster:
. .. Enshea_glia_3_p12h VNC_3_p6h Neur_T1_p12h
L2L3_ad Neur_Lamina_p0h Neur_Dm3_I_ad Astro_like_p72h Cortex_glia_2_p12h
Neur_T4_I_ad Neur_T2_T3_p12h Enshea_glia_1_p0h Enshea_glia_2_p3h Neur_Dev_2_p12h
Neur_Lamina_p3h Neur_T4T5_la Astro_like_ad TmY5a_II_ad VNC_4_p6h
VNC_3_p12h Neur_15a_ad Enshea_glia_3_p0h Neur_Dm8Dm11_p12h Glia_90_II_ad
Surface_glia_p3h Motor_neur_3_p0h KC_g_la Cortex_glia_p72h perineur_glia_p72h
Neur_26_p72h Neur_Dev_1_OL_p0h Neur_Dev_1_CB_p12h VNC_2_la Astro_like_p3h
Neur_Pm4_p72h Enshea_glia_2_p6h Surface_glia_la RNA_31_p6h Neur_T2_T3_p6h
Neur_Tm2_p72h Neur_T2_T3_p3h Enshea_glia_3_la TmY3_II_ad Neuroepi_Pre_p6h
VNC_4_p0h Neur_Dm8Dm11_p3h Motor_neur_2_p0h Neur_T4_p72h Cortex_glia_I_ad
VNC_2_p0h Cortex_glia_1_p0h Neur_Dm8Dm11_II_ad Neur_T2_T3_p0h Neur_97_II_ad
Neur_Poxn_ad 15b_Neur_ad Neur_Lamina_p12h Surface_glia_p12h LPC_p6h
VNC_3_p3h Motor_neur_1_p0h Neur_T2_p72h Neuroepi_Pre_p0h Motor_neur_3_la
LLPC1_Neur_ad Neur_T1_p0h KC_g_p0h Neur_T4T5_p0h Neur_Tm9_II_ad
Cortex_glia_1_p12h Perineur_glia_I_ad T1_ad Tm1TmY8_ad NB_Generation_p12h
Tm20_ad LPC_p3h Plasmatocyte_ad Tm2_ad Enshea_glia_2_p12h
Neur_Tm1_TmY8_ad NB_I_Pre_CB_p6h Poxn_p72h PB4_5_p12h VNC_2_p3h
TmY5a_I_ad Motor_neur_1_p12h Neur_Dm8Dm11_I_ad Neur_TmY3_p12h VNC_2_p12h
Neur_TmY3_p0h Surface_glia_p0h T5_I_ad CB_Imp_ad Neur_T4_II_ad
Cortex_glia_1_p3h Neur_Tm_la Neur_Pros_ad Neur_Dev_1_CB_p0h PB4_5_p0h
KCab_II_ad Neur_TmY3_p3h Tm4_I_ad Neur_T4T5_p6h Neur_C3_p72h
Neur_Dev_2_p6h TmY3_I_ad Enshea_glia_2_p0h KC_g_p3h Neur_Dev_1_OL_p3h
Neur_C2_II_ad Neur_C2C3_p0h Neur_Tm_p3h T1_p72h Neur_Mi15_II_ad
Cortex_glia_II_ad Motor_neur_3_p12h KCab_p3h PB4_5_II_ad RNA_31_p0h
Neuroepi_Pre_p3h PB4_5_p72h Enshea_glia_ad CB_Imp_p72h Astro_like_p6h
Enshea_glia_3_p6h Unk_I_ad VNC_1_p0h VNC_3_la Neuroepi_Pre_p12h
Neur_Dev_1_OL_p6h Neur_TmY5a_p72h PB4_5_I_ad Subperineur_glia_p72h Neur_Dev_2_p3h
NB_I_Pre_OL_p0h LLPC1_ad Tm3_p72h Photoreceptor_p3h perineur_glia_II_ad
Neur_Tm9_p72h Neur_C3_I_ad Tm20_p72h Neur_Tm_p0h Enshea_glia_3_p3h
Glia_90_I_ad Poxn_ad KCab_II_p72h Neur_Dm8Dm11_p6h Neur_15a_p72h
Neur_Tm_p12h Neur_T1_ad Neur_TmY3_p6h L2L3_Neur_ad Neur_Mi15_I_ad
KC_g_p72h Neur_Dm3_II_ad Cortex_glia_1_la Neur_Dev_1_CB_p3h 15b_ad
Capa_p3h Neur_Mi9_I_ad T5_II_ad Neur_Tm20_ad Neur_Mi1_II_ad
Enshea_glia_2_la Enshea_glia_Gliaad KCab_p12h Neur_C2_I_ad PB4_5_p6h
Capa_p6h Neur_C2C3_p12h VNC_1_p3h RNA_31_la Neur_T1_p6h
Neur_T2_I_ad KCab_p0h Neur_Dm8Dm11_p72h RNA_31_p3h Motor_neur_2_la
Neur_Dev_2_la NB_I_Pre_CB_la NB_I_Pre_CB_p12h NB_Generation_la LPC_la
TmY3_p72h NB_I_Pre_OL_la LPC_p12h Surface_glia_p6h Motor_neur_1_p3h
Neur_T2a_p72h Neuroepi_Pre_la NB_I_Pre_CB_p0h Neur_C2_p72h Neur_98_p72h
NB_I_Pre_OL_p12h Neur_Dev_1_OL_p12h Neur_T2a_I_ad Neur_Dev_2_p0h Neur_Lamina_p6h
Neur_Tm4_p72h Enshea_glia_1_p12h Neur_C2C3_p3h KCab_p6h Enshea_glia_1_p3h
Neur_T4T5_p3h Neur_Mi9_II_ad LPC_p0h Neur_Imp_ad Neur_Tm_p6h
Enshea_glia_1_p6h LLPC1_p72h KCg_Neur_ad Neur_Mi1_I_ad RNA_31_p12h
Neur_Mi9_p72h Neur_Pm4_ad PB4_5_p3h Neur_97_I_ad Neur_T1_p3h
NB_I_Pre_OL_p6h Capa_p0h Neur_T2a_II_ad Chiasm_glia_Gliaad Neur_Dm8Dm11_p0h
Motor_neur_1_p6h Neur_C2C3_p6h VNC_1_la KCab_I_Neur_ad Neur_Tm9_I_ad
Capa_la VNC_1_p12h NB_Generation_p3h NB_Generation_p6h VNC_2_p6h
Neur_T3_II_ad Motor_neur_3_p3h KC_g_p12h Neur_Tm3_ad KCab_I_ad
Astro_like_p12h Neur_T3_p72h NB_I_Pre_CB_p3h Neur_Dev_1_CB_la VNC_4_p12h
NB_Generation_p0h KCab_I_p72h VNC_1_p6h Motor_neur_3_p6h T5_p72h
Neur_Dev_1_OL_la Neur_T4T5_p12h Tm3_ad Neur_C3_II_ad Subperineur_glia_ad
VNC_3_p0h Neur_98_I_ad Neur_Tm2_ad Neur_Dev_1_CB_p6h Cortex_glia_1_p6h
L2L3_p72h Neur_26_ad Unk_p72h Photoreceptor_p12h Neur_Pros_p72h
Tm1TmY8_p72h Pm4_ad KCg_ad Neur_T3_I_ad Astro_like_CB_ad
Enshea_glia_p72h Astro_like_p0h NB_I_Pre_OL_p3h 15b_p72h KC_g_p6h
Neur_T2_II_ad Astro_like_la KCab_II_Neur_ad Neur_97_p72h Capa_p12h
Tm4_II_ad 26_ad Neur_98_II_ad Neur_Mi15_72h CB_Pros_ad
Neur_Dm3_p72h Motor_neu_1_la Photoreceptor_p6h Photoreceptor_ad Glia_90_p72h
VNC_4_p3h

Homo sapiens:
Cardiomyocyte Photoreceptor ECs_Intestine LECs_Intestine Stromal_Intestine
Hepatoblasts Myeloid_Lung Sympathoblasts Stromal_Lung Stromal_Heart
Schwann_Heart Stellate_Liver ENS_glia_Stomach LECs_Lung Adrenocortex
Stromal_Muscle Astro_Cerebellum Antigen_present Stellate_Muscle Goblet_Stomach
Stromal_Stomach Mesothelial_Intestine IGFBP1_DKK1_pos_cell VECs_Cerebrum SkMC
Retinal_pigment Lymphoid_Lung LECs_Heart VECs_Eye ENS_neur_Stomach
HCs_ACs STB_vCTB_I Ganglion_cell Myeloid_Placenta Stromal_Kidney
VECs_Placenta VECs_Heart Myeloid_Kidney Kidney_Unk_XIV Endocardial_cell
Astro_Oligo_Cerebrum Cerebrum_Unk_III .. Neuroendocrine_Lung EAT
ELF3_AGBL2_pos_cell Erythrob_Heart EC_Ciliated placenta_Lymphoid_cells PAEP_MECOM_pos_cell
Inh_neur_Cerebrum . ENS_neur_Intestine Myeloid_Heart Astro_Cerebrum
Chromaffin_Intestine Mesangial_cell Purkinje_Cerebellum EC_Thymus Intestine_Un_VIII
ENS_glia_Intestine Megakaryo_Lung VECs_Spleen Granule_neur Limbic_neur_Cerebrum
Megakaryo_Spleen Chromaffin_Adrenal Lymphoid_Myeloid_Muscle Megakaryo_Liver BAEC
Erythrob_Adrenal VECs_Thymus Stromal_Eye Metanephric_cell Lymphoid_Intestine
EC_Vascular Muscle_Unk_VII Myeloid_Intestine ExNeuron_Cerebrum UB_cell
EC_Stomach Thymocytes Schwann_Adrenal RPC_MG Stromal_Spleen
SMCs_Heart EVTs SMCs_Placenta Lymphoid_Heart Stromal_Placenta
VECs_Stomach Myeloid_Adrenal Lymphoid_Liver Myeloid_Liver HSCs_Liver
Kidney_Unk_VII Erythrob_Liver Eye_Unk_VI TGCs_Placenta Parietal_chief_cell
SMCs_Muscle VECs_Intestine VECs_Liver Inh_neur_Cerebellum Schwann_Muscle
Myeloid_Spleen Erythrob_Placenta SMC_Intestine


※Single-cell marker genes:


Oryza sativa:
Epidemics_R2 Root_cap_R1 Cortex_HS_R1 Root_hair_R1 Cortex_R1
Root_cap_R2 Endodermis_HS_R2 Endodermis_R2 Epidemics_HS_R1 Stele_R1
Root_cap_HS_R1 .. . Root_hair_R2 Endodermis_R1
Stele_R2 Epidemics_HS_R2 Cortex_R2 Root_hair_HS_R1 Root_cap_HS_R2
Stele_HS_R1 Endodermis_HS_R1 Root_hair_HS_R2 Stele_HS_R2 Cortex_HS_R2
Epidemics_R1

Zea mays:
Axillary_bud_II Leaf Seedling Root_II Root_I
.. Root_Crown_I Ear . Root_Crown_II
Tassel Axillary_bud_I

Danio rerio:
B_cell_pre_II myeloid_neutroph_I Multipotent_pro Lymphoid_pro Mono_myeloid_pre_II
HSPC_immature myeloid_neutroph_II Myeloid_pro myeloid_neutroph_III Erythroid_pro
Kidney_unk_II VE_niche .. B_cell .
Lymph_pro Kidney_unk_I T_cell B_cell_pre_I Red_cell_II
Red_cell_I Mono_myeloid_pre_I

Pan troglodytes:
Cortex_UpperL Cortex_L2-3_II Cortex_L3-5_III Chandelier Microglia
Cortex_L3-5_II Cortex_Vip Cortex_L2-3_III Oligo Cortex_L2-3_I
Cortex_L3-5_I Cortex_L4-6 Sst_CALB1_down Cortex_L2-6 Cortex_L5-6_II_THEMIS
Basket .. Cortex_L1-4 Cortex_L5-6_II_FEZF2 Cortex_L4-5_I
. Cortex_L5-6_I_FEZF2 OPC Sst_CALB1_up Cortex_L4-6_II
Cortex_L4-6_III Cortex_L5-6_I_THEMIS Astro

Mus musculus:
. .. Brain ExNeuron_PFC_ScPN Inh_Sst_P21
MFOL Tubule_Distal_CD Aorta_HFD_VII B_cell_Lung Pneumocyte_II
Aorta_VII Cortex_LayerIV ScPN_P7 CPN_P1 Macrophage_Heart
Neur_Lamp5 Astro_P1 EC_II_Brain CAF_III Aorta_IX
Aorta_HFD_X Aorta_HFD_IX Thymus Astro_Brain LargeIntestine
Inh_Pval_P21 Inh_neur_Cerebellum Oligo Tubule_Proxi Cerebellum
ScPN_I_P21 NFOL_P21 CthPN_I_P7 Duct_Collecting Aorta_HFD_IV
Enterocyte_Large Inh_Sst_P7 L5_IT Aorta_HFD_VIII Macrophage_BM
Aorta_III ScPN ScPN_P1 Aorta_HFD_III Collision_Cerebellum
CthPN_IV_P21 GrC_Cerebellum Inh_Npy_P7 Tubule_Distal B_cell_Active_Spleen
Inh_CGE Aorta_HFD_VI Cortex_Unk Macrophage_Brain L6_IT
T_cell_Spleen EC_I_Lung DC_Lung Inh_CGE_P1 Aorta_V
Inh_MGE CthPN_I_P21 Erythrob_BM Inh_Sst T_Reg_Thymus
BoneMarrow Mono_BM CthPN_I_P1 Inh_Pval Collision_PFC
HPC_BM L4 B_cell_Large Kidney Interneur_SOM
Spleen CAF_II MFOL_P21 ScPN_II_P21 EC_II_Liver
Vip Aorta_VI CAF_IV ExNeuron_PFC_CPN Microglia_Brain
Mono_Lung Inh_neur Oligo_Brain NFOL L2_3_IT
Aorta_HFD_V CthPN Astro_10X Podocyte L6_CT
Oligo_Cerebellum PFC CAF_I CPN_P7 Interneur_PFC
Collision_Spleen EC_I_Heart Inh_MGE_P1 L6b Aorta_HFD_I
B_cell_Small T_Reg_Spleen OPC SmallIntestine Hepatocyte
Astro_P21 Lung B_Immature_BM Collision_BM CPN
L5_PT B_cell_Active_Lung NK_cell_Lung Cardiomyocyte CthPN_II_P7
Heart Collision_Brain ExNeuron_PFC_CThPN Endothelial_I_Glomer Aorta_HFD_II
CAF_V Astro_PFC Inh_Npy_P21 Sperm Inh_Npy
T_cell_Thymus Oligo_PFC ExNeuron_Brain_CThPN ExNeuron_Brain_CPN Purkinje_Cerebellum
Enterocyte_Small B_cell_BM T_Reg_Lung B_cell_Spleen EC_I_Liver
Tubule_Proxi_S3 EC_II_Heart Cortex_LayerIV_P21 ExNeuron_ScPN Loop_henle
Inh_neur_PFC Sst CthPN_II_P1 Purkinje_Brain T_cell_Large
CthPN_III_P21 CthPN_II_P21 Astro_Cerebellum Aorta_II HPC_Lung
CAF_VI T_cell_Lung OPC_P1 Testes CPN_P21
Aorta_I Pneumocyte_I Aorta_VIII Aorta_IV EC_II_Lung
Astro_P7 Microglia_PFC Liver DC_Spleen OPC_P7
Pvalb Macrophage_Alveolar GrC_Brain Astro Cortex_LayerIV_P7

Macaca fascicularis:
lung_VI colon_XII kidney_VI spleen_VII colon_III
lung_III colon_II spleen_IV uterus_VIII liver1_VI
lung_IX liver2_VI lung_X heart_I spleen_XI
uterus_V spleen_VIII heart_VI kidney_VII kidney_III
colon_VI liver2_I spleen_III uterus_VII spleen_IX
liver1_V colon_IV colon_VII colon_IX liver2_VII
uterus_III .. liver2_II lung_IV lung_VII
kidney_II kidney_IV colon_XI . colon_V
spleen_I kidney_VIII heart_V uterus_IV liver1_I
liver1_III liver2_IV lung_I liver1_IV heart_III
lung_VIII heart_II colon_I kidney_I kidney_V
colon_X lung_II uterus_II spleen_V uterus_I
spleen_X heart_IV colon_XIII uterus_VI colon_VIII
lung_V spleen_VI spleen_II heart_VII liver2_III
colon_XIV liver2_V

Chlorocebus sabaeus:
retina_choroid_A_IV retina_choroid_D_VII retina_choroid_C_II retina_choroid_B_II retina_choroid_A_V
retina_choroid_B_X retina_choroid_D_VI retina_choroid_A_II retina_choroid_D_III retina_choroid_A_X
retina_choroid_A_IX retina_choroid_A_VIII retina_choroid_C_III retina_choroid_B_VIII retina_choroid_B_VI
retina_choroid_B_IV retina_choroid_C_IV .. retina_choroid_A_I retina_choroid_D_IX
retina_choroid_D_V retina_choroid_C_IX retina_choroid_C_VI retina_choroid_B_IX .
retina_choroid_A_VII retina_choroid_C_VIII retina_choroid_D_I retina_choroid_C_V retina_choroid_A_VI
retina_choroid_B_V retina_choroid_C_I retina_choroid_A_III retina_choroid_D_VIII retina_choroid_B_VII
retina_choroid_B_I retina_choroid_B_III retina_choroid_D_II retina_choroid_C_VII retina_choroid_D_IV

Callithrix jacchus:
MFOL Astro_Day0 Cortex_LayerIV_Y78 Inh_Sst_Y78 Astro_Y78
COP_Y78 Cortex_LayerIV ScPN_I_Day0 OPC_I_Day0 ExNeuron
NFOL_Y78 ScPN Inh_Vip ScPN_II_Day0 Inh_Pvalb
Inh_Sst Inh_NPY_Day0 Inh_NPY OPC_II_Day0 OPC_Y78
Inh_Vip_Y78 .. COP_Day0 . NFOL
CthPN Inh_Vip_I_Day0 Inh_Pvalb_Day0 OPC Inh_Vip_II_Day0
Inh_Sst_Day0 ScPN_III_Day0 Cortex_LayerIV_Day0 CPN ExNeuron_Day0
ExNeuron_Y78 COP CthPN_Y78 CthPN_II_Day0 CthPN_I_Day0
CPN_Day0

Macaca mulatta :
Cortex_UpperL Cortex_L2-3_II Cortex_L3-5_III Chandelier Microglia
Cortex_L3-5_II Cortex_Vip Cortex_L2-3_III Cortex_L2-3_I Cortex_L4-6
Sst_CALB1_down Cortex_L2-6 Cortex_L5-6_II_THEMIS Basket ..
Cortex_L1-4 Cortex_L5-6_II_FEZF2 Cortex_L4-5_I . Cortex_L5-6_I_FEZF2
OPC Sst_CALB1_up L3-5_RORB_1 Cortex_L4-6_II Cortex_L4-6_III
Cortex_L5-6_I_THEMIS Astro

Drosophila melanogaster:
. .. NB_Generation_p0h perineur_glia_II_ad KCab_p12h
Motor_neur_3_p6h KCab_p0h NB_I_Pre_OL_la L2L3_Neur_ad Neur_T2_T3_p12h
Neur_Dev_1_OL_p12h Cortex_glia_1_la Neur_Imp_ad Neur_T1_p3h Capa_la
Neur_Pros_ad Motor_neur_1_p0h Perineur_glia_I_ad Astro_like_p12h Subperineur_glia_p72h
Neur_Lamina_p3h VNC_1_la KCab_II_Neur_ad Cortex_glia_1_p12h LPC_p6h
Neur_Dm8Dm11_p0h NB_I_Pre_CB_p12h Photoreceptor_p12h Neur_T1_p12h Neur_T2_T3_p6h
Neur_C3_p72h Neur_T4T5_p6h Enshea_glia_2_p0h NB_Generation_p3h Capa_p6h
Neur_Pm4_ad Neur_TmY3_p3h TmY5a_II_ad Enshea_glia_1_p6h RNA_31_p12h
Neur_Tm_p6h RNA_31_la VNC_2_p0h Neur_Dev_2_p0h Neur_C2C3_p0h
Neur_TmY3_p12h VNC_2_p6h Neur_C2_p72h Neur_T4T5_p0h Astro_like_la
Neur_Dev_1_OL_p3h Neur_T3_II_ad VNC_3_p0h VNC_1_p0h Neur_Mi9_II_ad
VNC_4_p12h Cortex_glia_1_p6h Astro_like_p72h Surface_glia_p0h Neur_Tm_p0h
T5_II_ad Neur_Tm_la KCab_II_p72h Neur_Dev_2_p3h Motor_neur_3_p12h
CB_Pros_ad Astro_like_CB_ad perineur_glia_p72h PB4_5_p72h Neur_T3_p72h
VNC_4_p3h Neur_15a_ad PB4_5_p6h NB_I_Pre_OL_p12h Neur_Tm_p12h
Cortex_glia_1_p3h T5_p72h LPC_p0h Surface_glia_la VNC_4_p6h
PB4_5_II_ad L2L3_p72h Enshea_glia_2_p6h Subperineur_glia_ad Capa_p12h
Neur_C3_II_ad Neur_T1_p6h Astro_like_p0h KCg_Neur_ad Plasmatocyte_ad
Neur_Lamina_p6h Capa_p3h VNC_1_p6h Neuroepi_Pre_p6h Neur_Dev_2_p6h
Neur_T4T5_p12h Motor_neur_3_la NB_I_Pre_CB_p6h Tm3_ad LPC_la
Neur_Dm8Dm11_p3h CB_Imp_p72h Tm1TmY8_ad Neur_Dev_1_CB_p3h Neur_98_p72h
Cortex_glia_p72h Neur_Mi9_p72h KC_g_p3h Neur_TmY3_p0h LLPC1_Neur_ad
Neur_Mi15_II_ad Neur_Lamina_p0h Poxn_p72h Capa_p0h Neur_Dm8Dm11_p12h
Neur_T2_T3_p0h KC_g_p72h KC_g_p6h Neuroepi_Pre_p0h Motor_neur_3_p0h
Neur_Tm20_ad Enshea_glia_1_p3h Neuroepi_Pre_p3h Surface_glia_p12h RNA_31_p0h
Neur_TmY3_p6h Neur_Dev_1_OL_p6h VNC_4_p0h VNC_3_p3h Neur_TmY5a_p72h
NB_I_Pre_CB_p0h NB_I_Pre_CB_p3h NB_Generation_p6h KCab_I_Neur_ad Enshea_glia_2_la
Motor_neur_2_p0h Neur_Dev_1_CB_p6h RNA_31_p6h Enshea_glia_2_p3h Neur_Dev_2_p12h
VNC_2_p3h VNC_3_p6h Neur_Dev_2_la Enshea_glia_Gliaad Surface_glia_p3h
Neur_T2_II_ad KCab_I_p72h KC_g_la 15b_Neur_ad VNC_2_p12h
Tm2_ad Enshea_glia_ad Chiasm_glia_Gliaad Enshea_glia_3_p12h VNC_1_p3h
Neur_Dm8Dm11_II_ad TmY3_II_ad NB_Generation_p12h Enshea_glia_3_p6h Motor_neur_2_la
VNC_2_la Neur_T2_p72h Neur_Dev_1_CB_p0h Neur_T1_p0h Motor_neu_1_la
Neur_Dev_1_CB_p12h NB_Generation_la NB_I_Pre_CB_la Surface_glia_p6h VNC_1_p12h
Enshea_glia_3_la Neur_Lamina_p12h Neur_Mi1_II_ad Motor_neur_1_p3h PB4_5_p0h
Motor_neur_3_p3h Cortex_glia_I_ad Neur_97_p72h Neur_T4T5_la Neur_Dm8Dm11_p6h
Neur_C2C3_p3h Neur_T4_II_ad Enshea_glia_2_p12h Neur_Dev_1_CB_la Neur_T4_p72h
Enshea_glia_1_p0h KC_g_p0h Neur_C2C3_p12h Astro_like_ad PB4_5_p3h
Motor_neur_1_p6h Glia_90_II_ad Enshea_glia_3_p3h NB_I_Pre_OL_p6h KCab_II_ad
Neur_15a_p72h VNC_3_p12h Neur_97_II_ad Neur_Tm9_p72h Photoreceptor_p3h
Glia_90_p72h Enshea_glia_3_p0h Motor_neur_1_p12h Cortex_glia_II_ad Neur_C2C3_p6h
Neur_Mi15_72h VNC_3_la Tm3_p72h Neuroepi_Pre_la KC_g_p12h
Neur_Pm4_p72h Enshea_glia_1_p12h Neur_26_ad NB_I_Pre_OL_p0h Tm4_II_ad
Neur_Tm9_II_ad Astro_like_p3h Neur_C2_I_ad Neur_T2_T3_p3h Neur_T2a_p72h
LPC_p3h Cortex_glia_1_p0h Astro_like_p6h Neur_T4T5_p3h Neur_T2a_II_ad
Neur_98_I_ad LPC_p12h Neuroepi_Pre_p12h Neur_Tm2_p72h Cortex_glia_2_p12h
KCab_p3h Photoreceptor_ad 15b_p72h Neur_Poxn_ad NB_I_Pre_OL_p3h
Enshea_glia_p72h Neur_Dm3_II_ad Neur_T1_ad Tm1TmY8_p72h Neur_Tm_p3h
Photoreceptor_p6h KCab_p6h Neur_Dev_1_OL_p0h PB4_5_p12h Neur_Dev_1_OL_la
Glia_90_I_ad RNA_31_p3h T1_p72h Neur_Pros_p72h

Arabidopsis thaliana:
Root_embryo_I Root_Unk_I Root_embryo_IV Root_embryo_VII Root_embryo_VI
Root_embryo_II Root_Unk_III .. Stele_phloem Cortex
. Root_embryo_V Endodermis_III Pre_Cortex_Endo Root_embryo_III
Endodermis_I Epidermis Stele_peri Endodermis_II Stele_xylem

Homo sapiens:
. .. Cortex_UpperL ENS_glia_Stomach K562_High_II
293T_Low Jurkat_High Myeloid_Lung B_Cell_I_Hema Metanephric_cell
T_Pre_III_TME_BCC T_Pre_V_BCC CD8_eff_PBMC Stromal_Kidney Cortex_L2-3_II
Schwann_Heart VECs_Intestine Immune_P_VII_BCC Cortex_L3-5_III PBMC_II_Hema
MPAL5R_T1 Immune_P_VI_BCC Immune_P_IX_BCC SMCs_Heart Stromal_Heart
Erythrob_Adrenal T_Reg_Hema MPAL1_T2 Kidney_Unk_XIV Chandelier
CD4_T_Memo_I_Hema Photoreceptor VECs_Cerebrum TGCs_Placenta Myeloid_Adrenal
Immune_P_II_BCC Microglia PBMC_I_Hema Immune_P_I_BCC CD4_Memory_PBMC
Cortex_L3-5_II Cortex_Vip NK_Hema T_Pre_II_TME_BCC B_Pro_PBMC
Limbic_neur_Cerebrum Cortex_L2-3_III Adrenocortex VECs_Spleen Erythrob_Heart
SMC_Intestine Oligo Tumor_P_BCC CD34_HSC_Hema Lymphoid_Myeloid_Muscle
MPAL_CD34_D7T1 Cortex_L2-3_I Acinar_cell Cortex_L3-5_I Chromaffin_Adrenal
CD34_DC_Hema T_Pre_II_BCC Cortex_L4-6 Stromal_Placenta MCF10A_High
VECs_Heart Tcell_P_IV_TME_BCC Thymocytes SMCs_Placenta HSC_Hema
MPAL2_T1 Chromaffin_Intestine VECs_Pancreas DC_Hema Sst_CALB1_down
MEP_Hema Tcell_P_V_TME_BCC Megakaryo_Spleen CD34_Pro_IV_Hema T24_High
MPAL5_T1 CD4_T_Naive_II_Hema Muscle_Unk_VII Immune_P_V_BCC NK_PBMC
SMCs_Muscle Cortex_L2-6 T_Pre_IV_BCC ENS_neur_Intestine Ganglion_cell
Granule_neur Cortex_L5-6_II_THEMIS CD34_MEP_Hema HT1080_High K562_Low
Myeloid_Heart Immune_P_IV_BCC placenta_Lymphoid_cells THP1_Low CD14_Mono_PBMC
CD4_T_Memo_II_Hema Parietal_chief_cell BM_pDC_Hema ELF3_AGBL2_pos_cell HCs_ACs
Myeloid_Placenta Mono_Hema T_Pre_I_TME_BCC Megakaryo_Lung Basket
T_Pre_I_BCC BAEC PBMC_III_Hema Astro_Oligo_Cerebrum EAT
MPAL_PBMC_D12T2 Plasma Myeloid_Liver MPAL_PBMC_D12T3 EC_Thymus
HSC THP1_High CD4_Th_Hema MPAL5R_T2 BM_I_Hema
VECs_Lung Ductal_cell Unk_I_Hema CD34_PBMC_I_Hema K562_High_I
MCF7_Low Tcell_P_II_BCC MPAL4_T2 Erythrob_Placenta Mesangial_cell
CD34_BM_Hema Tcell_P_VI_TME_BCC EC_Vascular Cortex_L1-4 Cortex_L5-6_II_FEZF2
CD34_Pro_II_Hema GM12878_Low Cortex_L4-5_I CD34_Pro_III_Hema CD4_Naive_PBMC
CD34_CMP_Hema Unk_III_Hema VECs_Liver STB_vCTB_II Unk_II_Hema
T_Pre_VI_BCC Cerebrum_Unk_III MPAL_PBMC_D10T1 Antigen_present VECs_Placenta
VECs_Stomach ECs_Intestine Schwann_Muscle STB_vCTB_I T24_Low
MPAL_PBMC_D12T1 MPAL4_T1 UB_cell Cortex_L5-6_I_FEZF2 MPP_Hema
ExNeuron_Cerebrum GMP_Hema Myeloid_Kidney Astro_Cerebrum EC_Ciliated
MPAL3_T2 MPAL3_T1 MPAL_BMMC_D5T1 Hepatoblasts MCF10A_Low
pDC OPC LECs_Lung Myeloid_Intestine CMP_Hema
CD8_T_Memo_Hema Retinal_pigment Goblet_Stomach ENS_neur_Stomach Immune_P_III_BCC
RPC_MG Myeloid_Spleen Eye_Unk_VI Lymphoid_Intestine Sst_CALB1_up
HeLa_High Stromal_Eye CD8_T_Naive_Hema MPAL5_R1 CD34_BM_pDC_Hema
VECs_Eye Mesothelial_Intestine CD34_Mono_Hema T_Pre_VII_BCC Kidney_Unk_VII
293T_High MPAL_BMMC_D6T1 IGFBP1_DKK1_pos_cell Cardiomyocyte CD16_Mono_PBMC
Stromal_Spleen HeLa_Low T_Pre_III_BCC Stromal_Stomach Lymphoid_Myeloid_Pancreas
MPAL2_T2 LECs_Heart ENS_glia_Intestine Neuroendocrine_Lung Sympathoblasts
Stellate_Muscle Endocardial_cell VECs_Thymus Cortex_L4-6_II MPAL_CD34_D9T1
B_Pre_PBMC Immune_P_VIII_BCC MPAL_CD34_D8T1 Purkinje_Cerebellum EVTs
CD34_MPP_Hema SkMC Islet_Endocrine Erythrob_Liver Tcell_P_IV_BCC
Stromal_Intestine CD4_T_Naive_I_Hema Lymphoid_Heart Jurkat_Low Schwann_Adrenal
Stellate_Liver HSCs_Liver Tcell_P_VII_TME_BCC Cortex_L4-6_III HT1080_Low
PBMC_IV_Hema PAEP_MECOM_pos_cell MPAL1_T1 GMP Cortex_L5-6_I_THEMIS
Astro_Cerebellum GM12878_High B_Cell_Hema Lymphoid_Lung Stromal_Muscle
CD34_GMP_Hema T_DN_PBMC CD8_Naive_PBMC cDC Intestine_Un_VIII
MPAL_PBMC_D11T1 Stromal_Pancreas Tcell_P_I_BCC NK_cell_Hema Stromal_Lung
Inh_neur_Cerebrum MCF7_High LECs_Intestine Lymphoid_Liver Tcell_P_I_TME_BCC
Megakaryo_Liver Astro CD34_Pro_I_Hema


※Single-cell enhancers:


Oryza sativa:
Root_hair_HS_R2 Epidemics_R1 Stele_R2 Endodermis_R2 Root_cap_HS_R2
Root_cap_R2 Epidemics_HS_R2 Cortex_HS_R2 Root_hair_R1 ..
. Stele_HS_R2 Root_hair_R2 Stele_R1 Cortex_R2
Root_hair_HS_R1 Cortex_R1 Endodermis_R1 Epidemics_HS_R1 Endodermis_HS_R1
Root_cap_R1 Epidemics_R2 Endodermis_HS_R2 Root_cap_HS_R1 Stele_HS_R1
Cortex_HS_R1

Zea mays:
Tassel Axillary_bud_II Root_Crown_II Root_Crown_I Ear
.. . Seedling Leaf Root_I
Axillary_bud_I Root_II

Danio rerio:
B_cell_pre_II Red_cell_I Lymphoid_pro HSPC_immature T_cell
VE_niche Red_cell_II Kidney_unk_II Mono_myeloid_pre_I Mono_myeloid_pre_II
myeloid_neutroph_III .. myeloid_neutroph_I B_cell_pre_I Lymph_pro
Erythroid_pro . Myeloid_pro myeloid_neutroph_II B_cell
Kidney_unk_I Multipotent_pro

Pan troglodytes:
Microglia Astro Cortex_L5-6_II_FEZF2 Cortex_L4-6_III Cortex_L3-5_III
Sst_CALB1_down Cortex_L1-4 Oligo Cortex_L5-6_I_FEZF2 Cortex_L4-5_I
Cortex_L5-6_I_THEMIS Sst_CALB1_up .. Cortex_L5-6_II_THEMIS .
Cortex_L2-3_I Cortex_L4-6_II Cortex_L3-5_I Cortex_UpperL Chandelier
OPC Cortex_L2-6 Basket Cortex_L2-3_III Cortex_Vip
Cortex_L3-5_II Cortex_L4-6 Cortex_L2-3_II

Mus musculus:
. .. EC_I_Heart CAF_V Collision_Brain
Inh_neur HPC_Lung Inh_CGE Enterocyte_Large Cardiomyocyte
Neur_Lamp5 L5_PT Lung Cortex_LayerIV_P7 Inh_Sst_P7
Inh_MGE_P1 L4 L5_IT Astro EC_II_Heart
Endothelial_I_Glomer B_cell_Small ExNeuron_Brain_CPN Spleen NFOL_P21
CAF_VI DC_Spleen Astro_10X Collision_Spleen ScPN_P7
CthPN_I_P1 EC_II_Liver CAF_III Sst Astro_Cerebellum
Aorta_HFD_III CthPN_I_P21 Inh_CGE_P1 B_cell_Large Podocyte
Aorta_V Aorta_HFD_IX thymocyte_DP_WT_1 Microglia_PFC Astro_P1
thymocyte_DP_KO_1 T_Reg_Spleen L2_3_IT ExNeuron_PFC_ScPN Oligo_PFC
MFOL Cerebellum thymocyte_DP_WT_2 NK_cell_Lung Inh_Npy
DC_Lung T_Reg_Thymus EC_II_Brain Oligo CthPN_II_P7
Inh_Npy_P21 Cortex_Unk B_cell_BM thymocyte_DP_KO_2 Cortex_LayerIV_P21
Erythrob_BM CAF_I Aorta_I Aorta_VII Oligo_Cerebellum
ScPN Astro_P7 EC_II_Lung CPN_P21 Aorta_HFD_II
ExNeuron_PFC_CThPN Pneumocyte_I Astro_Brain EC_I_Lung CthPN
Mono_BM Aorta_HFD_VI Collision_Cerebellum B_cell_Lung GrC_Cerebellum
Inh_Npy_P7 CAF_IV Aorta_III Tubule_Distal BoneMarrow
B_cell_Spleen Brain CPN_P7 CthPN_III_P21 Pvalb
CPN_P1 Aorta_HFD_VII ScPN_II_P21 Astro_PFC Purkinje_Cerebellum
Aorta_HFD_X Inh_Sst T_cell_Lung Aorta_IV Tubule_Proxi
Kidney Enterocyte_Small ExNeuron_ScPN Testes Aorta_IX
Purkinje_Brain HPC_BM Interneur_SOM Aorta_HFD_IV CPN
Macrophage_BM SmallIntestine Inh_Sst_P21 PFC Aorta_VI
CAF_II Aorta_HFD_I Pneumocyte_II Inh_Pval_P21 Cortex_LayerIV
CthPN_II_P1 Hepatocyte ScPN_P1 Macrophage_Brain EC_I_Liver
Aorta_II B_cell_Active_Lung Inh_MGE CthPN_II_P21 Collision_BM
DC_BM Vip Sperm Liver MFOL_P21
L6_CT Astro_P21 Oligo_Brain L6_IT OPC
Thymus Mono_Lung B_cell_Active_Spleen Loop_henle B_Immature_BM
GrC_Brain Tubule_Distal_CD CthPN_IV_P21 NFOL Macrophage_Alveolar
ExNeuron_PFC_CPN Aorta_HFD_VIII T_Reg_Lung T_cell_Spleen T_cell_Thymus
LargeIntestine L6b Collision_PFC Interneur_PFC Heart
Inh_Pval Inh_neur_PFC Tubule_Proxi_S3 ExNeuron_Brain_CThPN Inh_neur_Cerebellum
Aorta_HFD_V ScPN_I_P21 Macrophage_Heart Microglia_Brain Duct_Collecting
T_cell_Large OPC_P7 Aorta_VIII CthPN_I_P7 OPC_P1

Macaca fascicularis:
spleen_IX heart_IV uterus_VIII liver2_V spleen_VI
colon_VI spleen_V heart_II spleen_I liver1_I
liver1_II uterus_VII kidney_V lung_V heart_VI
colon_XIV liver2_II kidney_IV spleen_VII liver1_III
kidney_VIII liver2_VII colon_V colon_XII liver2_VI
colon_X kidney_II uterus_III liver2_IV spleen_IV
spleen_VIII liver2_I lung_I kidney_VI liver1_IV
colon_IV liver1_VI uterus_VI colon_III spleen_XI
colon_XIII heart_I .. colon_I uterus_V
colon_XI liver2_III colon_IX uterus_IV .
heart_III heart_V colon_VIII kidney_III lung_IX
spleen_X lung_VII lung_II colon_II lung_X
colon_VII uterus_I lung_IV lung_III liver1_V
kidney_VII spleen_II kidney_I lung_VIII spleen_III
heart_VII uterus_II lung_VI

Chlorocebus sabaeus:
retina_choroid_A_IV retina_choroid_D_I retina_choroid_A_V retina_choroid_D_IV retina_choroid_D_II
retina_choroid_D_VII retina_choroid_B_VII retina_choroid_C_IV retina_choroid_B_V retina_choroid_A_I
retina_choroid_A_VI retina_choroid_C_VII retina_choroid_D_VI retina_choroid_B_III ..
retina_choroid_A_VIII . retina_choroid_C_VIII retina_choroid_B_VIII retina_choroid_A_VII
retina_choroid_B_X retina_choroid_C_II retina_choroid_C_VI retina_choroid_A_X retina_choroid_A_III
retina_choroid_B_I retina_choroid_C_III retina_choroid_D_IX retina_choroid_D_V retina_choroid_B_VI
retina_choroid_B_IX retina_choroid_D_VIII retina_choroid_D_III retina_choroid_C_I retina_choroid_C_IX
retina_choroid_A_II retina_choroid_C_V retina_choroid_B_II retina_choroid_A_IX retina_choroid_B_IV

Callithrix jacchus:
Cortex_LayerIV_Y78 COP_Y78 CthPN_I_Day0 Inh_Sst_Y78 Inh_NPY_Day0
NFOL_Y78 OPC_I_Day0 Inh_Vip_Y78 Inh_Pvalb_Day0 MFOL
ExNeuron Inh_Sst_Day0 ScPN .. CthPN
ScPN_I_Day0 CthPN_Y78 Astro_Y78 CPN_Day0 Inh_Vip
. Inh_NPY Inh_Vip_II_Day0 Inh_Sst Cortex_LayerIV_Day0
OPC_II_Day0 CPN OPC_Y78 ScPN_III_Day0 ExNeuron_Y78
ScPN_II_Day0 Cortex_LayerIV Astro_Day0 OPC NFOL
COP_Day0 CthPN_II_Day0 ExNeuron_Day0 COP Inh_Pvalb
Inh_Vip_I_Day0

Macaca mulatta :
Microglia Astro Cortex_L5-6_II_FEZF2 Cortex_L4-6_III Cortex_L3-5_III
L3-5_RORB_1 Sst_CALB1_down Cortex_L1-4 Cortex_L5-6_I_FEZF2 Cortex_L4-5_I
Cortex_L5-6_I_THEMIS Sst_CALB1_up .. Cortex_L5-6_II_THEMIS .
Cortex_L2-3_I Cortex_L4-6_II Cortex_UpperL Chandelier OPC
Cortex_L2-6 Basket Cortex_L2-3_III Cortex_Vip Cortex_L3-5_II
Cortex_L4-6 Cortex_L2-3_II

Drosophila melanogaster:
. .. Enshea_glia_3_p12h VNC_3_p6h Neur_T1_p12h
L2L3_ad Neur_Lamina_p0h Neur_Dm3_I_ad Astro_like_p72h Cortex_glia_2_p12h
Neur_T4_I_ad Neur_T2_T3_p12h Enshea_glia_1_p0h Enshea_glia_2_p3h Neur_Dev_2_p12h
Neur_Lamina_p3h Neur_T4T5_la Astro_like_ad TmY5a_II_ad VNC_4_p6h
VNC_3_p12h Neur_15a_ad Enshea_glia_3_p0h Neur_Dm8Dm11_p12h Glia_90_II_ad
Surface_glia_p3h Motor_neur_3_p0h KC_g_la Cortex_glia_p72h perineur_glia_p72h
Neur_26_p72h Neur_Dev_1_OL_p0h Neur_Dev_1_CB_p12h VNC_2_la Astro_like_p3h
Neur_Pm4_p72h Enshea_glia_2_p6h Surface_glia_la RNA_31_p6h Neur_T2_T3_p6h
Neur_Tm2_p72h Neur_T2_T3_p3h Enshea_glia_3_la TmY3_II_ad Neuroepi_Pre_p6h
VNC_4_p0h Neur_Dm8Dm11_p3h Motor_neur_2_p0h Neur_T4_p72h Cortex_glia_I_ad
VNC_2_p0h Cortex_glia_1_p0h Neur_Dm8Dm11_II_ad Neur_T2_T3_p0h Neur_97_II_ad
Neur_Poxn_ad 15b_Neur_ad Neur_Lamina_p12h Surface_glia_p12h LPC_p6h
VNC_3_p3h Motor_neur_1_p0h Neur_T2_p72h Neuroepi_Pre_p0h Motor_neur_3_la
LLPC1_Neur_ad Neur_T1_p0h KC_g_p0h Neur_T4T5_p0h Neur_Tm9_II_ad
Cortex_glia_1_p12h Perineur_glia_I_ad T1_ad Tm1TmY8_ad NB_Generation_p12h
Tm20_ad LPC_p3h Plasmatocyte_ad Tm2_ad Enshea_glia_2_p12h
Neur_Tm1_TmY8_ad NB_I_Pre_CB_p6h Poxn_p72h PB4_5_p12h VNC_2_p3h
TmY5a_I_ad Motor_neur_1_p12h Neur_Dm8Dm11_I_ad Neur_TmY3_p12h VNC_2_p12h
Neur_TmY3_p0h Surface_glia_p0h T5_I_ad CB_Imp_ad Neur_T4_II_ad
Cortex_glia_1_p3h Neur_Tm_la Neur_Pros_ad Neur_Dev_1_CB_p0h PB4_5_p0h
KCab_II_ad Neur_TmY3_p3h Tm4_I_ad Neur_T4T5_p6h Neur_C3_p72h
Neur_Dev_2_p6h TmY3_I_ad Enshea_glia_2_p0h KC_g_p3h Neur_Dev_1_OL_p3h
Neur_C2_II_ad Neur_C2C3_p0h Neur_Tm_p3h T1_p72h Neur_Mi15_II_ad
Cortex_glia_II_ad Motor_neur_3_p12h KCab_p3h PB4_5_II_ad RNA_31_p0h
Neuroepi_Pre_p3h PB4_5_p72h Enshea_glia_ad CB_Imp_p72h Astro_like_p6h
Enshea_glia_3_p6h Unk_I_ad VNC_1_p0h VNC_3_la Neuroepi_Pre_p12h
Neur_Dev_1_OL_p6h Neur_TmY5a_p72h PB4_5_I_ad Subperineur_glia_p72h Neur_Dev_2_p3h
NB_I_Pre_OL_p0h LLPC1_ad Tm3_p72h Photoreceptor_p3h perineur_glia_II_ad
Neur_Tm9_p72h Neur_C3_I_ad Tm20_p72h Neur_Tm_p0h Enshea_glia_3_p3h
Glia_90_I_ad Poxn_ad KCab_II_p72h Neur_Dm8Dm11_p6h Neur_15a_p72h
Neur_Tm_p12h Neur_T1_ad Neur_TmY3_p6h L2L3_Neur_ad Neur_Mi15_I_ad
KC_g_p72h Neur_Dm3_II_ad Cortex_glia_1_la Neur_Dev_1_CB_p3h 15b_ad
Capa_p3h Neur_Mi9_I_ad T5_II_ad Neur_Tm20_ad Neur_Mi1_II_ad
Enshea_glia_2_la Enshea_glia_Gliaad KCab_p12h Neur_C2_I_ad PB4_5_p6h
Capa_p6h Neur_C2C3_p12h VNC_1_p3h RNA_31_la Neur_T1_p6h
Neur_T2_I_ad KCab_p0h Neur_Dm8Dm11_p72h RNA_31_p3h Motor_neur_2_la
Neur_Dev_2_la NB_I_Pre_CB_la NB_I_Pre_CB_p12h NB_Generation_la LPC_la
TmY3_p72h NB_I_Pre_OL_la LPC_p12h Surface_glia_p6h Motor_neur_1_p3h
Neur_T2a_p72h Neuroepi_Pre_la NB_I_Pre_CB_p0h Neur_C2_p72h Neur_98_p72h
NB_I_Pre_OL_p12h Neur_Dev_1_OL_p12h Neur_T2a_I_ad Neur_Dev_2_p0h Neur_Lamina_p6h
Neur_Tm4_p72h Enshea_glia_1_p12h Neur_C2C3_p3h KCab_p6h Enshea_glia_1_p3h
Neur_T4T5_p3h Neur_Mi9_II_ad LPC_p0h Neur_Imp_ad Neur_Tm_p6h
Enshea_glia_1_p6h LLPC1_p72h KCg_Neur_ad Neur_Mi1_I_ad RNA_31_p12h
Neur_Mi9_p72h Neur_Pm4_ad PB4_5_p3h Neur_97_I_ad Neur_T1_p3h
NB_I_Pre_OL_p6h Capa_p0h Neur_T2a_II_ad Chiasm_glia_Gliaad Neur_Dm8Dm11_p0h
Motor_neur_1_p6h Neur_C2C3_p6h VNC_1_la KCab_I_Neur_ad Neur_Tm9_I_ad
Capa_la VNC_1_p12h NB_Generation_p3h NB_Generation_p6h VNC_2_p6h
Neur_T3_II_ad Motor_neur_3_p3h KC_g_p12h Neur_Tm3_ad KCab_I_ad
Astro_like_p12h Neur_T3_p72h NB_I_Pre_CB_p3h Neur_Dev_1_CB_la VNC_4_p12h
NB_Generation_p0h KCab_I_p72h VNC_1_p6h Motor_neur_3_p6h T5_p72h
Neur_Dev_1_OL_la Neur_T4T5_p12h Tm3_ad Neur_C3_II_ad Subperineur_glia_ad
VNC_3_p0h Neur_98_I_ad Neur_Tm2_ad Neur_Dev_1_CB_p6h Cortex_glia_1_p6h
L2L3_p72h Neur_26_ad Unk_p72h Photoreceptor_p12h Neur_Pros_p72h
Tm1TmY8_p72h Pm4_ad KCg_ad Neur_T3_I_ad Astro_like_CB_ad
Enshea_glia_p72h Astro_like_p0h NB_I_Pre_OL_p3h 15b_p72h KC_g_p6h
Neur_T2_II_ad Astro_like_la KCab_II_Neur_ad Neur_97_p72h Capa_p12h
Tm4_II_ad 26_ad Neur_98_II_ad Neur_Mi15_72h CB_Pros_ad
Neur_Dm3_p72h Motor_neu_1_la Photoreceptor_p6h Photoreceptor_ad Glia_90_p72h
VNC_4_p3h

Gallus gallus:
.. . Neur_crest

Arabidopsis thaliana:
Root_embryo_IV Endodermis_II Endodermis_III Epidermis Root_Unk_II
.. Root_embryo_VI Root_embryo_I . Root_embryo_V
Root_embryo_II Root_embryo_VII Stele_phloem Pre_Cortex_Endo Root_Unk_III
Cortex Root_embryo_III Endodermis_I Stele_xylem Stele_peri
Root_Unk_I

Homo sapiens:
. .. MPP_Hema HSC CD14_Mono_II
Cardiomyocyte Photoreceptor CD8_T_Naive_Hema ECs_Intestine LECs_Intestine
CD4_Memory_PBMC Stromal_Intestine CD8_CM 293T_Low Hepatoblasts
NK_Hema Myeloid_Lung Sympathoblasts Tcell_P_I_TME_BCC Stromal_Lung
CD4_T_Naive_I_Hema Stromal_Heart Jurkat_Low Tcell_P_VI_TME_BCC CD14_Mono_I
Microglia MPAL5R_T1 CD34_GMP_Hema Astro pDC
Schwann_Heart CD8_T_Memo_Hema CD4_N2 CD34_MEP_Hema Stellate_Liver
CD34_Pro_II_Hema Unk_I_Hema MPAL1_T2 T24_High Lymphoid_Myeloid_Pancreas
Cortex_L5-6_II_FEZF2 ENS_glia_Stomach T24_Low CD8_eff_PBMC MPAL3_T2
CD34_Pro_IV_Hema LECs_Lung Adrenocortex Stromal_Muscle Astro_Cerebellum
Antigen_present Stellate_Muscle Cortex_L4-6_III Goblet_Stomach Stromal_Stomach
Cortex_L3-5_III Mesothelial_Intestine IGFBP1_DKK1_pos_cell GMP_Hema PBMC_III_Hema
Sst_CALB1_down VECs_Cerebrum MEP_Hema MCF7_High Early_Eryth
Immune_P_V_BCC SkMC Retinal_pigment MCF7_Low MPAL_PBMC_D11T1
T_Pre_V_BCC Lymphoid_Lung LECs_Heart THP1_Low Cortex_L1-4
VECs_Eye CD34_Pro_III_Hema ENS_neur_Stomach BM_I_Hema HCs_ACs
CD4_T_Memo_II_Hema MPAL_PBMC_D10T1 CD34_Pro_I_Hema MPAL4_T1 T_Pre_III_BCC
STB_vCTB_I Ganglion_cell Oligo Tcell_P_V_TME_BCC Myeloid_Placenta
Stromal_Kidney CD4_Naive_PBMC VECs_Placenta GMP_Neut Immune_P_II_BCC
CD34_PBMC_I_Hema CD34_HSC_Hema MPAL_BMMC_D6T1 Cortex_L5-6_I_FEZF2 Tcell_P_II_TME_BCC
VECs_Heart MPAL2_T1 Cortex_L4-5_I CD14_Mono_PBMC Cortex_L5-6_I_THEMIS
CD34_DC_Hema CLP_II NK_cell_Hema Myeloid_Kidney VECs_Lung
Kidney_Unk_XIV HSC_Hema Sst_CALB1_up Endocardial_cell Astro_Oligo_Cerebrum
Pancreas_Unk_I MPAL4_T2 Tcell_P_VII_TME_BCC Plasma Immune_P_VIII_BCC
Cerebrum_Unk_III T_Pre_II_BCC THP1_High CD34_BM_pDC_Hema VECs_Pancreas
HT1080_High Late_Eryth MPAL_PBMC_D12T2 Jurkat_High T_Pre_I_BCC
Neuroendocrine_Lung CD4_T_Naive_II_Hema B_Pre EAT ELF3_AGBL2_pos_cell
GMP B_Cell_Hema Erythrob_Heart Tcell_P_III_BCC EC_Ciliated
Unk_III_Hema Cortex_L5-6_II_THEMIS T_Pre_VI_BCC K562_High_I T_Pre_IV_BCC
placenta_Lymphoid_cells PAEP_MECOM_pos_cell Inh_neur_Cerebrum ENS_neur_Intestine Myeloid_Heart
HeLa_Low Tcell_P_IV_TME_BCC Astro_Cerebrum MPAL_PBMC_D12T1 Chromaffin_Intestine
Tcell_P_IV_BCC MPAL2_T2 Mesangial_cell Unk_II_Hema PBMC_I_Hema
T_DN_PBMC Purkinje_Cerebellum CD8_EM EC_Thymus MCF10A_High
K562_High_II Intestine_Un_VIII Ductal_cell Mono_Hema MPAL5R_T2
GM12878_Low ENS_glia_Intestine Acinar_cell Immune_P_VII_BCC T_Pre_I_TME_BCC
Megakaryo_Lung Tumor_P_BCC VECs_Spleen Granule_neur CMP_Hema
Immune_P_IV_BCC Cortex_L2-3_I Limbic_neur_Cerebrum NK_PBMC T_Pre_III_TME_BCC
HT1080_Low Tcell_P_III_TME_BCC Megakaryo_Spleen CD4_Th_Hema CD16_Mono_PBMC
Stromal_Pancreas MPAL_BMMC_D5T1 Chromaffin_Adrenal CLP_I Lymphoid_Myeloid_Muscle
Megakaryo_Liver K562_Low BAEC cDC Early_Baso
T_Pre_VII_BCC CD8_Naive_PBMC MPAL5_R1 293T_High Erythrob_Adrenal
GM12878_High PBMC_II_Hema MPAL3_T1 VECs_Thymus Stromal_Eye
Metanephric_cell Lymphoid_Intestine Cortex_L4-6_II EC_Vascular Immune_P_III_BCC
MPAL_PBMC_D12T3 Cortex_L3-5_I Cortex_UpperL Muscle_Unk_VII B_Cell_I_Hema
Myeloid_Intestine ExNeuron_Cerebrum UB_cell EC_Stomach Islet_Endocrine
Thymocytes Schwann_Adrenal CD8_N Chandelier Immune_P_I_BCC
RPC_MG Stromal_Spleen SMCs_Heart OPC CD4_T_Memo_I_Hema
Immune_P_IX_BCC Cortex_L2-6 EVTs SMCs_Placenta HeLa_High
Lymphoid_Heart Stromal_Placenta Tcell_P_II_BCC CD34_BM_Hema MPAL_CD34_D9T1
STB_vCTB_II Basket VECs_Stomach Tcell_P_I_BCC B_Pro_PBMC
Myeloid_Adrenal CD34_Mono_Hema Lymphoid_Liver PBMC_IV_Hema Myeloid_Liver
MPAL_CD34_D8T1 T_Pre_II_TME_BCC Cortex_L2-3_III HSCs_Liver Cortex_Vip
MPAL1_T1 Cortex_L3-5_II Kidney_Unk_VII Erythrob_Liver Cortex_L4-6
Cortex_L2-3_II Eye_Unk_VI CD4_M TGCs_Placenta CD34_CMP_Hema
CD34_MPP_Hema B_Pre_PBMC Parietal_chief_cell SMCs_Muscle VECs_Intestine
DC_Hema T_Reg_Hema MPAL_CD34_D7T1 Immune_P_VI_BCC VECs_Liver
Inh_neur_Cerebellum Schwann_Muscle Myeloid_Spleen BM_pDC_Hema Erythrob_Placenta
MCF10A_Low CD4_N1 SMC_Intestine CMP_LMPP MPAL5_T1


※Enhancer-gene interactions at the single-cell level:


Oryza sativa:
Stele_R1 Root_hair_HS_R1 Root_cap_HS_R1 Epidemics_HS_R1 Root_hair_R2
Endodermis_HS_R2 Endodermis_HS_R1 Root_hair_HS_R2 Endodermis_R1 Stele_HS_R1
Cortex_R2 Root_cap_R1 .. Stele_HS_R2 .
Root_cap_HS_R2 Epidemics_R1 Cortex_R1 Epidemics_HS_R2 Cortex_HS_R2
Epidemics_R2 Stele_R2 Root_hair_R1 Cortex_HS_R1 Root_cap_R2
Endodermis_R2

Zea mays:
Seedling Axillary_bud_I Root_I Axillary_bud_II Root_Crown_I
.. . Root_Crown_II Leaf Ear
Tassel Root_II

Danio rerio:
Multipotent_pro Kidney_unk_II Red_cell_I B_cell T_cell
Kidney_unk_I Red_cell_II Lymphoid_pro Mono_myeloid_pre_I Mono_myeloid_pre_II
HSPC_immature VE_niche .. myeloid_neutroph_I B_cell_pre_I
Myeloid_pro . myeloid_neutroph_III Erythroid_pro Lymph_pro
B_cell_pre_II myeloid_neutroph_II

Pan troglodytes:
Astro Sst_CALB1_down Oligo Cortex_L5-6_II_FEZF2 Cortex_L5-6_II_THEMIS
Basket Cortex_Vip Cortex_L4-6_II Cortex_L2-6 Cortex_UpperL
Cortex_L4-6_III Sst_CALB1_up Cortex_L5-6_I_THEMIS Cortex_L2-3_III Cortex_L3-5_I
.. Cortex_L1-4 Cortex_L4-5_I . Cortex_L5-6_I_FEZF2
Cortex_L2-3_I Microglia Cortex_L4-6 Chandelier Cortex_L3-5_II
Cortex_L3-5_III OPC Cortex_L2-3_II

Mus musculus:
. .. thymocyte_DP_KO_2 Astro Inh_CGE
Oligo_PFC Testes ExNeuron_Brain_CThPN Thymus Oligo
Inh_Sst_P7 Tubule_Distal_CD ExNeuron_PFC_CThPN T_cell_Large ScPN_II_P21
Sperm NFOL_P21 Microglia_PFC Aorta_IV Tubule_Proxi
DC_BM NFOL Tubule_Distal Aorta_HFD_V ExNeuron_ScPN
Astro_Brain Inh_neur_Cerebellum Collision_Spleen PFC MFOL
Astro_P7 CAF_VI Pneumocyte_II T_cell_Spleen EC_II_Liver
Inh_Pval_P21 CPN_P1 L5_IT CthPN_I_P7 Cerebellum
Macrophage_BM Interneur_SOM EC_II_Heart T_Reg_Lung Aorta_I
Aorta_II LargeIntestine Collision_PFC DC_Lung Inh_Sst_P21
CthPN_III_P21 Tubule_Proxi_S3 Collision_Brain B_cell_Active_Lung Astro_Cerebellum
thymocyte_DP_WT_1 B_cell_Small Astro_P1 B_cell_BM Duct_Collecting
CthPN_I_P21 Erythrob_BM Aorta_V thymocyte_DP_KO_1 Spleen
thymocyte_DP_WT_2 Macrophage_Heart EC_II_Lung CAF_IV B_Immature_BM
Purkinje_Cerebellum Enterocyte_Small L6_IT Podocyte CthPN_IV_P21
Astro_P21 T_cell_Lung Cortex_LayerIV GrC_Brain Loop_henle
Aorta_HFD_II Oligo_Cerebellum ScPN OPC_P7 CthPN
Aorta_HFD_I L2_3_IT Aorta_HFD_VI EC_I_Lung Inh_Npy
Aorta_HFD_VIII B_cell_Spleen L6b Neur_Lamp5 T_Reg_Thymus
B_cell_Lung MFOL_P21 Inh_MGE Inh_CGE_P1 Cardiomyocyte
Purkinje_Brain Aorta_HFD_X CAF_III Inh_neur Astro_PFC
CthPN_I_P1 CPN_P7 CPN_P21 ScPN_I_P21 Interneur_PFC
Brain Mono_Lung Pvalb Aorta_HFD_III BoneMarrow
Microglia_Brain Hepatocyte T_Reg_Spleen L4 NK_cell_Lung
OPC_P1 HPC_Lung Enterocyte_Large Cortex_LayerIV_P7 DC_Spleen
T_cell_Thymus Oligo_Brain HPC_BM ExNeuron_PFC_CPN Aorta_IX
Pneumocyte_I CAF_I ExNeuron_Brain_CPN L5_PT Aorta_HFD_IV
Collision_BM EC_II_Brain Liver CthPN_II_P1 Aorta_HFD_VII
SmallIntestine Inh_neur_PFC CAF_II Vip Mono_BM
Kidney Sst EC_I_Liver Inh_Pval Macrophage_Alveolar
CAF_V Cortex_Unk CPN EC_I_Heart L6_CT
GrC_Cerebellum Astro_10X Aorta_HFD_IX Inh_Sst B_cell_Large
Cortex_LayerIV_P21 Inh_Npy_P7 Endothelial_I_Glomer ScPN_P1 Collision_Cerebellum
Inh_Npy_P21 Inh_MGE_P1 Lung Macrophage_Brain Aorta_VII
ScPN_P7 CthPN_II_P21 Aorta_VIII Aorta_III B_cell_Active_Spleen
Aorta_VI Heart OPC CthPN_II_P7 ExNeuron_PFC_ScPN

Macaca fascicularis:
spleen_IV lung_VII colon_III lung_IV liver2_III
uterus_III colon_XIII heart_VI liver1_IV kidney_III
lung_VI colon_X spleen_V heart_IV spleen_XI
lung_V heart_II colon_XII spleen_IX heart_III
lung_I spleen_II uterus_IV liver1_VI liver2_V
colon_II liver2_I colon_VII colon_VI uterus_VI
colon_IV lung_VIII kidney_VII spleen_I uterus_II
uterus_VII heart_V .. lung_X colon_XIV
kidney_VIII . kidney_IV kidney_V lung_II
colon_IX liver2_VI lung_IX liver1_III uterus_V
lung_III spleen_VIII spleen_VI colon_I uterus_VIII
liver2_VII liver1_V colon_XI kidney_VI kidney_I
heart_I spleen_X uterus_I liver2_II liver1_I
spleen_VII colon_VIII spleen_III heart_VII liver1_II
colon_V liver2_IV kidney_II

Chlorocebus sabaeus:
retina_choroid_B_IX retina_choroid_B_IV retina_choroid_D_II retina_choroid_D_III retina_choroid_A_V
retina_choroid_D_VIII retina_choroid_C_IX retina_choroid_A_VI retina_choroid_C_VI retina_choroid_D_V
retina_choroid_D_IX retina_choroid_A_IV retina_choroid_C_I retina_choroid_A_VII retina_choroid_B_VI
retina_choroid_D_IV .. retina_choroid_B_III retina_choroid_B_V .
retina_choroid_B_II retina_choroid_C_VIII retina_choroid_B_I retina_choroid_A_I retina_choroid_B_X
retina_choroid_A_IX retina_choroid_A_II retina_choroid_B_VIII retina_choroid_C_VII retina_choroid_C_III
retina_choroid_A_VIII retina_choroid_D_VI retina_choroid_C_II retina_choroid_C_IV retina_choroid_A_X
retina_choroid_C_V retina_choroid_A_III retina_choroid_B_VII retina_choroid_D_I retina_choroid_D_VII

Callithrix jacchus:
OPC_II_Day0 Inh_Vip NFOL Astro_Day0 Inh_Sst_Day0
Inh_Pvalb MFOL OPC_I_Day0 ExNeuron_Y78 Inh_NPY
ExNeuron_Day0 OPC_Y78 CthPN_Y78 ScPN_II_Day0 Cortex_LayerIV_Y78
ScPN_III_Day0 .. COP_Y78 Cortex_LayerIV Inh_Vip_Y78
CthPN_I_Day0 ScPN CthPN . NFOL_Y78
CthPN_II_Day0 COP ExNeuron Inh_Sst_Y78 Cortex_LayerIV_Day0
COP_Day0 ScPN_I_Day0 CPN_Day0 Inh_Pvalb_Day0 CPN
Inh_Sst Inh_Vip_I_Day0 Inh_NPY_Day0 Inh_Vip_II_Day0 Astro_Y78
OPC

Macaca mulatta :
Astro Sst_CALB1_down Cortex_L5-6_II_FEZF2 Cortex_L5-6_II_THEMIS Basket
Cortex_Vip Cortex_L4-6_II Cortex_L2-6 Cortex_UpperL Cortex_L4-6_III
Sst_CALB1_up Cortex_L5-6_I_THEMIS Cortex_L2-3_III .. Cortex_L1-4
Cortex_L4-5_I . Cortex_L5-6_I_FEZF2 Cortex_L2-3_I Microglia
Cortex_L4-6 L3-5_RORB_1 Chandelier Cortex_L3-5_II Cortex_L3-5_III
OPC Cortex_L2-3_II

Drosophila melanogaster:
. .. Neur_C2_I_ad Neur_Dev_1_CB_p0h Neur_Lamina_p3h
NB_I_Pre_OL_p3h Neur_Dev_1_CB_la NB_I_Pre_CB_p3h Neur_T2_II_ad 15b_ad
NB_I_Pre_CB_p0h Neur_T4_II_ad Tm1TmY8_p72h Neur_Dm8Dm11_I_ad Poxn_ad
VNC_2_p12h RNA_31_p0h Neur_Lamina_p6h Neur_C2C3_p0h Neur_Tm9_II_ad
LPC_p6h Poxn_p72h Cortex_glia_1_p12h Neur_Dm8Dm11_p12h Neur_Pros_ad
Neur_T4T5_p3h Motor_neu_1_la Photoreceptor_p3h KC_g_p3h RNA_31_p3h
Tm4_II_ad RNA_31_p6h Cortex_glia_1_la Surface_glia_p12h Neur_TmY3_p0h
Glia_90_II_ad Neur_15a_ad Glia_90_I_ad Neur_Mi15_72h Tm20_ad
Enshea_glia_1_p3h Cortex_glia_2_p12h NB_I_Pre_CB_p12h Neur_T1_ad Neur_T2a_p72h
Neur_T2_T3_p3h VNC_4_p0h LLPC1_ad Neur_Tm_la LPC_p0h
Neur_Dev_2_p6h Enshea_glia_3_p12h Neur_Mi9_p72h Chiasm_glia_Gliaad Unk_I_ad
Neuroepi_Pre_p3h L2L3_p72h NB_I_Pre_OL_p6h TmY5a_II_ad TmY5a_I_ad
VNC_3_p6h Neur_15a_p72h Neur_Tm_p12h Neur_98_p72h KCab_II_p72h
Photoreceptor_p12h T5_p72h Neur_26_p72h Neur_Tm9_p72h Neur_TmY3_p3h
Neur_Tm2_ad Neur_T4_p72h Neur_Dm8Dm11_p3h Neur_Dev_1_CB_p3h Neuroepi_Pre_la
Cortex_glia_I_ad Astro_like_CB_ad RNA_31_la Neur_Pros_p72h Neur_T3_p72h
15b_p72h NB_Generation_p12h Photoreceptor_p6h Neur_Poxn_ad Neur_Dev_2_la
perineur_glia_II_ad Neur_C2C3_p12h PB4_5_II_ad Neur_98_II_ad L2L3_Neur_ad
Enshea_glia_3_la Astro_like_ad NB_Generation_p3h Neur_Dev_1_CB_p12h Neur_97_p72h
Neur_Mi1_II_ad Neur_98_I_ad Neur_Pm4_p72h KCab_I_ad Neuroepi_Pre_p6h
PB4_5_p6h Capa_la Tm3_ad Neur_Dev_2_p12h VNC_2_p0h
Neur_Mi15_II_ad VNC_3_p0h Enshea_glia_p72h Neur_Tm4_p72h Photoreceptor_ad
Neur_C2C3_p3h Neur_C3_II_ad VNC_1_p3h Astro_like_la Neur_T1_p6h
26_ad Neur_Tm2_p72h VNC_4_p6h Neur_T2_I_ad Cortex_glia_1_p6h
VNC_2_p6h Motor_neur_1_p12h Surface_glia_p0h KCab_I_p72h KCg_ad
Motor_neur_1_p3h Tm20_p72h CB_Pros_ad KCab_p12h Neur_Tm9_I_ad
Plasmatocyte_ad Neur_Dev_2_p3h Neur_Dev_1_OL_p6h Enshea_glia_1_p0h Neur_Lamina_p12h
Cortex_glia_II_ad Neur_TmY5a_p72h LPC_la NB_Generation_p0h Enshea_glia_3_p0h
Pm4_ad Enshea_glia_2_p6h Subperineur_glia_p72h KC_g_p0h Neur_T4T5_la
PB4_5_I_ad PB4_5_p3h Tm3_p72h Motor_neur_3_p3h Neur_Dm3_I_ad
Neur_Dev_1_OL_p0h Neur_T3_II_ad VNC_3_p3h VNC_1_la VNC_4_p12h
Neur_Dev_1_OL_la Neur_C2_p72h Neur_Lamina_p0h T1_p72h Surface_glia_la
Cortex_glia_1_p3h Motor_neur_2_p0h VNC_1_p12h Neur_TmY3_p6h KC_g_p6h
KC_g_p12h Neur_T4T5_p6h Neur_Dev_1_CB_p6h LLPC1_Neur_ad KCab_I_Neur_ad
15b_Neur_ad Motor_neur_3_p0h Neur_Mi15_I_ad NB_Generation_la LPC_p12h
Neur_Tm_p0h Tm4_I_ad PB4_5_p72h Neur_Dm3_II_ad VNC_1_p6h
Neur_Imp_ad Neur_Tm_p3h Enshea_glia_2_p0h Enshea_glia_ad VNC_3_p12h
Neur_T3_I_ad Neur_C2C3_p6h T5_I_ad TmY3_I_ad Motor_neur_1_p6h
Astro_like_p72h LPC_p3h Neur_T1_p3h Motor_neur_1_p0h T5_II_ad
Motor_neur_3_la Neur_T1_p12h Neur_Dev_1_OL_p3h Enshea_glia_2_p3h CB_Imp_ad
Neuroepi_Pre_p0h LLPC1_p72h KCab_p3h Neur_Mi9_II_ad PB4_5_p0h
Neur_C3_p72h Astro_like_p3h NB_I_Pre_OL_la KC_g_p72h Surface_glia_p3h
KCab_II_ad Neur_Tm_p6h Surface_glia_p6h Neur_T4T5_p0h Glia_90_p72h
Enshea_glia_Gliaad Neur_26_ad Neur_T4T5_p12h Capa_p0h Neur_C2_II_ad
Neur_T2_T3_p0h VNC_4_p3h Cortex_glia_1_p0h Tm2_ad NB_I_Pre_CB_p6h
Neur_Mi9_I_ad KCab_II_Neur_ad Motor_neur_2_la Enshea_glia_3_p6h KCg_Neur_ad
Neur_C3_I_ad VNC_3_la Neur_Tm3_ad NB_Generation_p6h Astro_like_p0h
CB_Imp_p72h Enshea_glia_2_p12h Capa_p12h Neur_T2_T3_p12h KCab_p0h
Neur_Mi1_I_ad Motor_neur_3_p6h Motor_neur_3_p12h Neur_Dm3_p72h KCab_p6h
Neur_TmY3_p12h Neur_T2_T3_p6h Astro_like_p6h VNC_1_p0h Neur_T2_p72h
Neur_T1_p0h Neur_Dev_2_p0h Enshea_glia_3_p3h Neur_T2a_I_ad T1_ad
TmY3_II_ad L2L3_ad Unk_p72h Subperineur_glia_ad Neuroepi_Pre_p12h
Capa_p3h Astro_like_p12h Neur_Dm8Dm11_p72h Neur_Dm8Dm11_II_ad NB_I_Pre_OL_p12h
Neur_Tm20_ad Enshea_glia_2_la Cortex_glia_p72h VNC_2_p3h RNA_31_p12h
Enshea_glia_1_p12h KC_g_la Neur_Dev_1_OL_p12h Neur_97_I_ad PB4_5_p12h
TmY3_p72h Neur_T4_I_ad VNC_2_la Tm1TmY8_ad Neur_Dm8Dm11_p6h
Capa_p6h Neur_Tm1_TmY8_ad Enshea_glia_1_p6h Neur_T2a_II_ad Neur_97_II_ad
Neur_Pm4_ad Neur_Dm8Dm11_p0h NB_I_Pre_OL_p0h perineur_glia_p72h NB_I_Pre_CB_la
Perineur_glia_I_ad

Gallus gallus:
Neur_crest .. .

Arabidopsis thaliana:
Pre_Cortex_Endo Root_Unk_I Stele_xylem Stele_peri Endodermis_I
Root_embryo_II .. Endodermis_III Root_embryo_V Endodermis_II
. Stele_phloem Root_embryo_VII Epidermis Root_embryo_I
Root_embryo_IV Root_Unk_II Root_Unk_III Root_embryo_III Root_embryo_VI
Cortex

Homo sapiens:
. .. T_Pre_II_BCC ELF3_AGBL2_pos_cell Stromal_Spleen
Immune_P_V_BCC Astro Megakaryo_Liver Myeloid_Spleen Tcell_P_III_TME_BCC
MPAL5_T1 VECs_Thymus Erythrob_Heart VECs_Cerebrum Sst_CALB1_down
Oligo CD34_MEP_Hema CD14_Mono_II Lymphoid_Liver T_Reg_Hema
CD34_HSC_Hema B_Pre Jurkat_High T_Pre_VII_BCC Tcell_P_I_BCC
BM_I_Hema Chromaffin_Intestine VECs_Spleen CD14_Mono_I Kidney_Unk_XIV
Cortex_L5-6_II_FEZF2 B_Cell_I_Hema Early_Eryth 293T_Low Megakaryo_Spleen
ENS_neur_Intestine MPAL4_T2 MPAL_BMMC_D5T1 MPAL_CD34_D7T1 Antigen_present
Inh_neur_Cerebellum Tcell_P_V_TME_BCC Cortex_L5-6_II_THEMIS VECs_Eye MPAL4_T1
DC_Hema Mono_Hema Ganglion_cell CD4_Th_Hema Unk_III_Hema
CD34_Pro_III_Hema Metanephric_cell ECs_Intestine B_Cell_Hema LECs_Lung
Mesangial_cell T_Pre_II_TME_BCC K562_Low CD34_BM_pDC_Hema Thymocytes
HT1080_Low Retinal_pigment CD34_Pro_II_Hema EVTs Unk_II_Hema
CD4_T_Naive_I_Hema GMP EAT TGCs_Placenta Hepatoblasts
LECs_Intestine CD34_Pro_IV_Hema MPAL5R_T1 HeLa_Low MCF7_High
Stromal_Pancreas SMCs_Heart Basket Cortex_Vip SkMC
Tcell_P_VII_TME_BCC Pancreas_Unk_I MPAL_PBMC_D12T1 Astro_Oligo_Cerebrum Cortex_L4-6_II
BAEC Astro_Cerebellum CD4_T_Naive_II_Hema STB_vCTB_I Cortex_L2-6
EC_Ciliated MCF10A_Low CD4_T_Memo_I_Hema HSC SMC_Intestine
T24_Low CD34_PBMC_I_Hema Myeloid_Liver PBMC_III_Hema Eye_Unk_VI
Megakaryo_Lung HT1080_High CD8_Naive_PBMC Immune_P_VI_BCC Stellate_Muscle
Immune_P_IX_BCC EC_Vascular VECs_Placenta Astro_Cerebrum HSC_Hema
CD4_Naive_PBMC CD34_Mono_Hema ExNeuron_Cerebrum Cortex_UpperL GM12878_Low
STB_vCTB_II B_Pre_PBMC Goblet_Stomach Myeloid_Intestine Cortex_L4-6_III
pDC Inh_neur_Cerebrum MPAL_PBMC_D10T1 Sst_CALB1_up K562_High_II
PAEP_MECOM_pos_cell Erythrob_Adrenal Purkinje_Cerebellum MPAL_CD34_D8T1 CD4_N2
Erythrob_Liver Late_Eryth Cortex_L5-6_I_THEMIS CD4_T_Memo_II_Hema Mesothelial_Intestine
Schwann_Heart Cortex_L2-3_III Cortex_L3-5_I SMCs_Placenta MCF10A_High
CLP_II MPAL3_T1 Immune_P_III_BCC CD8_N Unk_I_Hema
Ductal_cell Cortex_L1-4 MPAL1_T2 Stromal_Kidney Tcell_P_IV_BCC
GMP_Hema SMCs_Muscle CLP_I Schwann_Muscle Tcell_P_VI_TME_BCC
CD34_CMP_Hema placenta_Lymphoid_cells Kidney_Unk_VII Lymphoid_Heart Limbic_neur_Cerebrum
cDC CD34_Pro_I_Hema T_Pre_I_BCC T_Pre_III_BCC Cortex_L4-5_I
293T_High VECs_Liver T_Pre_IV_BCC Immune_P_I_BCC MPAL2_T2
ENS_neur_Stomach CD34_BM_Hema Stellate_Liver VECs_Pancreas VECs_Heart
Stromal_Muscle Tcell_P_II_BCC MPP_Hema HSCs_Liver Cardiomyocyte
Immune_P_II_BCC ENS_glia_Stomach MPAL_PBMC_D11T1 MPAL5_R1 MPAL2_T1
Myeloid_Lung T_Pre_V_BCC Cortex_L5-6_I_FEZF2 GMP_Neut Immune_P_IV_BCC
VECs_Stomach Cerebrum_Unk_III CD8_T_Naive_Hema PBMC_IV_Hema Tumor_P_BCC
Lymphoid_Intestine MCF7_Low Stromal_Placenta Adrenocortex CD8_CM
CD34_GMP_Hema Endocardial_cell Acinar_cell CD34_MPP_Hema NK_PBMC
NK_cell_Hema Tcell_P_III_BCC T_Pre_VI_BCC MPAL_CD34_D9T1 Sympathoblasts
Stromal_Stomach GM12878_High Lymphoid_Myeloid_Muscle RPC_MG Stromal_Intestine
Granule_neur T_DN_PBMC Plasma MPAL_BMMC_D6T1 Neuroendocrine_Lung
Stromal_Eye Tcell_P_I_TME_BCC Cortex_L2-3_I Muscle_Unk_VII PBMC_I_Hema
Microglia PBMC_II_Hema IGFBP1_DKK1_pos_cell MPAL_PBMC_D12T3 HeLa_High
CD16_Mono_PBMC Myeloid_Placenta VECs_Intestine CD4_Memory_PBMC CD8_T_Memo_Hema
Islet_Endocrine MPAL3_T2 CD34_DC_Hema MPAL1_T1 Tcell_P_II_TME_BCC
Jurkat_Low Stromal_Heart CD14_Mono_PBMC Myeloid_Kidney Cortex_L4-6
Photoreceptor B_Pro_PBMC T24_High NK_Hema Immune_P_VIII_BCC
EC_Thymus VECs_Lung Early_Baso T_Pre_III_TME_BCC K562_High_I
Parietal_chief_cell ENS_glia_Intestine CMP_Hema EC_Stomach Myeloid_Heart
THP1_High CD8_eff_PBMC CD8_EM UB_cell Chandelier
Cortex_L3-5_II Chromaffin_Adrenal BM_pDC_Hema CD4_M Schwann_Adrenal
Lymphoid_Myeloid_Pancreas CMP_LMPP Stromal_Lung Lymphoid_Lung CD4_N1
Intestine_Un_VIII LECs_Heart T_Pre_I_TME_BCC THP1_Low Erythrob_Placenta
MEP_Hema MPAL5R_T2 MPAL_PBMC_D12T2 Cortex_L3-5_III Tcell_P_IV_TME_BCC
Myeloid_Adrenal HCs_ACs OPC Cortex_L2-3_II Immune_P_VII_BCC


※SNPs within single-cell enhancers:


Homo sapiens:
. .. MPP_Hema HSC CD14_Mono_II
Cardiomyocyte Photoreceptor CD8_T_Naive_Hema ECs_Intestine LECs_Intestine
CD4_Memory_PBMC Stromal_Intestine CD8_CM 293T_Low Hepatoblasts
NK_Hema Myeloid_Lung Sympathoblasts Tcell_P_I_TME_BCC Stromal_Lung
CD4_T_Naive_I_Hema Stromal_Heart Jurkat_Low Tcell_P_VI_TME_BCC CD14_Mono_I
Microglia MPAL5R_T1 CD34_GMP_Hema Astro pDC
Schwann_Heart CD8_T_Memo_Hema CD4_N2 CD34_MEP_Hema Stellate_Liver
CD34_Pro_II_Hema Unk_I_Hema MPAL1_T2 T24_High Lymphoid_Myeloid_Pancreas
Cortex_L5-6_II_FEZF2 ENS_glia_Stomach T24_Low CD8_eff_PBMC MPAL3_T2
CD34_Pro_IV_Hema LECs_Lung Adrenocortex Stromal_Muscle Astro_Cerebellum
Antigen_present Stellate_Muscle Cortex_L4-6_III Goblet_Stomach Stromal_Stomach
Cortex_L3-5_III Mesothelial_Intestine IGFBP1_DKK1_pos_cell GMP_Hema PBMC_III_Hema
Sst_CALB1_down VECs_Cerebrum MEP_Hema MCF7_High Early_Eryth
Immune_P_V_BCC SkMC Retinal_pigment MCF7_Low MPAL_PBMC_D11T1
T_Pre_V_BCC Lymphoid_Lung LECs_Heart THP1_Low Cortex_L1-4
VECs_Eye CD34_Pro_III_Hema ENS_neur_Stomach BM_I_Hema HCs_ACs
CD4_T_Memo_II_Hema MPAL_PBMC_D10T1 CD34_Pro_I_Hema MPAL4_T1 T_Pre_III_BCC
STB_vCTB_I Ganglion_cell Oligo Tcell_P_V_TME_BCC Myeloid_Placenta
Stromal_Kidney CD4_Naive_PBMC VECs_Placenta GMP_Neut Immune_P_II_BCC
CD34_PBMC_I_Hema CD34_HSC_Hema MPAL_BMMC_D6T1 Cortex_L5-6_I_FEZF2 Tcell_P_II_TME_BCC
VECs_Heart MPAL2_T1 Cortex_L4-5_I CD14_Mono_PBMC Cortex_L5-6_I_THEMIS
CD34_DC_Hema CLP_II NK_cell_Hema Myeloid_Kidney VECs_Lung
Kidney_Unk_XIV HSC_Hema Sst_CALB1_up Endocardial_cell Astro_Oligo_Cerebrum
Pancreas_Unk_I MPAL4_T2 Tcell_P_VII_TME_BCC Plasma Immune_P_VIII_BCC
Cerebrum_Unk_III T_Pre_II_BCC THP1_High CD34_BM_pDC_Hema VECs_Pancreas
HT1080_High Late_Eryth MPAL_PBMC_D12T2 Jurkat_High T_Pre_I_BCC
Neuroendocrine_Lung CD4_T_Naive_II_Hema B_Pre EAT ELF3_AGBL2_pos_cell
GMP B_Cell_Hema Erythrob_Heart Tcell_P_III_BCC EC_Ciliated
Unk_III_Hema Cortex_L5-6_II_THEMIS T_Pre_VI_BCC K562_High_I T_Pre_IV_BCC
placenta_Lymphoid_cells PAEP_MECOM_pos_cell Inh_neur_Cerebrum ENS_neur_Intestine Myeloid_Heart
HeLa_Low Tcell_P_IV_TME_BCC Astro_Cerebrum MPAL_PBMC_D12T1 Chromaffin_Intestine
Tcell_P_IV_BCC MPAL2_T2 Mesangial_cell Unk_II_Hema PBMC_I_Hema
T_DN_PBMC Purkinje_Cerebellum CD8_EM EC_Thymus MCF10A_High
K562_High_II Intestine_Un_VIII Ductal_cell Mono_Hema MPAL5R_T2
GM12878_Low ENS_glia_Intestine Acinar_cell Immune_P_VII_BCC T_Pre_I_TME_BCC
Megakaryo_Lung Tumor_P_BCC VECs_Spleen Granule_neur CMP_Hema
Immune_P_IV_BCC Cortex_L2-3_I Limbic_neur_Cerebrum NK_PBMC T_Pre_III_TME_BCC
HT1080_Low Tcell_P_III_TME_BCC Megakaryo_Spleen CD4_Th_Hema CD16_Mono_PBMC
Stromal_Pancreas MPAL_BMMC_D5T1 Chromaffin_Adrenal CLP_I Lymphoid_Myeloid_Muscle
Megakaryo_Liver K562_Low BAEC cDC Early_Baso
T_Pre_VII_BCC CD8_Naive_PBMC MPAL5_R1 293T_High Erythrob_Adrenal
GM12878_High PBMC_II_Hema MPAL3_T1 VECs_Thymus Stromal_Eye
Metanephric_cell Lymphoid_Intestine Cortex_L4-6_II EC_Vascular Immune_P_III_BCC
MPAL_PBMC_D12T3 Cortex_L3-5_I Cortex_UpperL Muscle_Unk_VII B_Cell_I_Hema
Myeloid_Intestine ExNeuron_Cerebrum UB_cell EC_Stomach Islet_Endocrine
Thymocytes Schwann_Adrenal CD8_N Chandelier Immune_P_I_BCC
RPC_MG Stromal_Spleen SMCs_Heart OPC CD4_T_Memo_I_Hema
Immune_P_IX_BCC Cortex_L2-6 EVTs SMCs_Placenta HeLa_High
Lymphoid_Heart Stromal_Placenta Tcell_P_II_BCC CD34_BM_Hema MPAL_CD34_D9T1
STB_vCTB_II Basket VECs_Stomach Tcell_P_I_BCC B_Pro_PBMC
Myeloid_Adrenal CD34_Mono_Hema Lymphoid_Liver PBMC_IV_Hema Myeloid_Liver
MPAL_CD34_D8T1 T_Pre_II_TME_BCC Cortex_L2-3_III HSCs_Liver Cortex_Vip
MPAL1_T1 Cortex_L3-5_II Kidney_Unk_VII Erythrob_Liver Cortex_L4-6
Cortex_L2-3_II Eye_Unk_VI CD4_M TGCs_Placenta CD34_CMP_Hema
CD34_MPP_Hema B_Pre_PBMC Parietal_chief_cell SMCs_Muscle VECs_Intestine
DC_Hema T_Reg_Hema MPAL_CD34_D7T1 Immune_P_VI_BCC VECs_Liver
Inh_neur_Cerebellum Schwann_Muscle Myeloid_Spleen BM_pDC_Hema Erythrob_Placenta
MCF10A_Low CD4_N1 SMC_Intestine CMP_LMPP MPAL5_T1


※TF binding motifs within single-cell enhancers:


Danio rerio:
B_cell_pre_II Red_cell_I Lymphoid_pro HSPC_immature T_cell
VE_niche Red_cell_II Kidney_unk_II Mono_myeloid_pre_I Mono_myeloid_pre_II
myeloid_neutroph_III .. myeloid_neutroph_I B_cell_pre_I Lymph_pro
Erythroid_pro . Myeloid_pro myeloid_neutroph_II B_cell
Kidney_unk_I Multipotent_pro

Mus musculus:
. .. EC_I_Heart CAF_V Collision_Brain
Inh_neur HPC_Lung Inh_CGE Enterocyte_Large Cardiomyocyte
Neur_Lamp5 L5_PT Lung Cortex_LayerIV_P7 Inh_Sst_P7
Inh_MGE_P1 L4 L5_IT Astro EC_II_Heart
Endothelial_I_Glomer B_cell_Small ExNeuron_Brain_CPN Spleen NFOL_P21
CAF_VI DC_Spleen Astro_10X Collision_Spleen ScPN_P7
CthPN_I_P1 EC_II_Liver CAF_III Sst Astro_Cerebellum
Aorta_HFD_III CthPN_I_P21 Inh_CGE_P1 B_cell_Large Podocyte
Aorta_V Aorta_HFD_IX thymocyte_DP_WT_1 Microglia_PFC Astro_P1
thymocyte_DP_KO_1 T_Reg_Spleen L2_3_IT ExNeuron_PFC_ScPN Oligo_PFC
MFOL Cerebellum thymocyte_DP_WT_2 NK_cell_Lung Inh_Npy
DC_Lung T_Reg_Thymus EC_II_Brain Oligo CthPN_II_P7
Inh_Npy_P21 Cortex_Unk B_cell_BM thymocyte_DP_KO_2 Cortex_LayerIV_P21
Erythrob_BM CAF_I Aorta_I Aorta_VII Oligo_Cerebellum
ScPN Astro_P7 EC_II_Lung CPN_P21 Aorta_HFD_II
ExNeuron_PFC_CThPN Pneumocyte_I Astro_Brain EC_I_Lung CthPN
Mono_BM Aorta_HFD_VI Collision_Cerebellum B_cell_Lung GrC_Cerebellum
Inh_Npy_P7 CAF_IV Aorta_III Tubule_Distal BoneMarrow
B_cell_Spleen Brain CPN_P7 CthPN_III_P21 Pvalb
CPN_P1 Aorta_HFD_VII ScPN_II_P21 Astro_PFC Purkinje_Cerebellum
Aorta_HFD_X Inh_Sst T_cell_Lung Aorta_IV Tubule_Proxi
Kidney Enterocyte_Small ExNeuron_ScPN Testes Aorta_IX
Purkinje_Brain HPC_BM Interneur_SOM Aorta_HFD_IV CPN
Macrophage_BM SmallIntestine Inh_Sst_P21 PFC Aorta_VI
CAF_II Aorta_HFD_I Pneumocyte_II Inh_Pval_P21 Cortex_LayerIV
CthPN_II_P1 Hepatocyte ScPN_P1 Macrophage_Brain EC_I_Liver
Aorta_II B_cell_Active_Lung Inh_MGE CthPN_II_P21 Collision_BM
DC_BM Vip Sperm Liver MFOL_P21
L6_CT Astro_P21 Oligo_Brain L6_IT OPC
Thymus Mono_Lung B_cell_Active_Spleen Loop_henle B_Immature_BM
GrC_Brain Tubule_Distal_CD CthPN_IV_P21 NFOL Macrophage_Alveolar
ExNeuron_PFC_CPN Aorta_HFD_VIII T_Reg_Lung T_cell_Spleen T_cell_Thymus
LargeIntestine L6b Collision_PFC Interneur_PFC Heart
Inh_Pval Inh_neur_PFC Tubule_Proxi_S3 ExNeuron_Brain_CThPN Inh_neur_Cerebellum
Aorta_HFD_V ScPN_I_P21 Macrophage_Heart Microglia_Brain Duct_Collecting
T_cell_Large OPC_P7 Aorta_VIII CthPN_I_P7 OPC_P1

Drosophila melanogaster:
. .. Enshea_glia_3_p12h VNC_3_p6h Neur_T1_p12h
L2L3_ad Neur_Lamina_p0h Neur_Dm3_I_ad Astro_like_p72h Cortex_glia_2_p12h
Neur_T4_I_ad Neur_T2_T3_p12h Enshea_glia_1_p0h Enshea_glia_2_p3h Neur_Dev_2_p12h
Neur_Lamina_p3h Neur_T4T5_la Astro_like_ad TmY5a_II_ad VNC_4_p6h
VNC_3_p12h Neur_15a_ad Enshea_glia_3_p0h Neur_Dm8Dm11_p12h Glia_90_II_ad
Surface_glia_p3h Motor_neur_3_p0h KC_g_la Cortex_glia_p72h perineur_glia_p72h
Neur_26_p72h Neur_Dev_1_OL_p0h Neur_Dev_1_CB_p12h VNC_2_la Astro_like_p3h
Neur_Pm4_p72h Enshea_glia_2_p6h Surface_glia_la RNA_31_p6h Neur_T2_T3_p6h
Neur_Tm2_p72h Neur_T2_T3_p3h Enshea_glia_3_la TmY3_II_ad Neuroepi_Pre_p6h
VNC_4_p0h Neur_Dm8Dm11_p3h Motor_neur_2_p0h Neur_T4_p72h Cortex_glia_I_ad
VNC_2_p0h Cortex_glia_1_p0h Neur_Dm8Dm11_II_ad Neur_T2_T3_p0h Neur_97_II_ad
Neur_Poxn_ad 15b_Neur_ad Neur_Lamina_p12h Surface_glia_p12h LPC_p6h
VNC_3_p3h Motor_neur_1_p0h Neur_T2_p72h Neuroepi_Pre_p0h Motor_neur_3_la
LLPC1_Neur_ad Neur_T1_p0h KC_g_p0h Neur_T4T5_p0h Neur_Tm9_II_ad
Cortex_glia_1_p12h Perineur_glia_I_ad T1_ad Tm1TmY8_ad NB_Generation_p12h
Tm20_ad LPC_p3h Plasmatocyte_ad Tm2_ad Enshea_glia_2_p12h
Neur_Tm1_TmY8_ad NB_I_Pre_CB_p6h Poxn_p72h PB4_5_p12h VNC_2_p3h
TmY5a_I_ad Motor_neur_1_p12h Neur_Dm8Dm11_I_ad Neur_TmY3_p12h VNC_2_p12h
Neur_TmY3_p0h Surface_glia_p0h T5_I_ad CB_Imp_ad Neur_T4_II_ad
Cortex_glia_1_p3h Neur_Tm_la Neur_Pros_ad Neur_Dev_1_CB_p0h PB4_5_p0h
KCab_II_ad Neur_TmY3_p3h Tm4_I_ad Neur_T4T5_p6h Neur_C3_p72h
Neur_Dev_2_p6h TmY3_I_ad Enshea_glia_2_p0h KC_g_p3h Neur_Dev_1_OL_p3h
Neur_C2_II_ad Neur_C2C3_p0h Neur_Tm_p3h T1_p72h Neur_Mi15_II_ad
Cortex_glia_II_ad Motor_neur_3_p12h KCab_p3h PB4_5_II_ad RNA_31_p0h
Neuroepi_Pre_p3h PB4_5_p72h Enshea_glia_ad CB_Imp_p72h Astro_like_p6h
Enshea_glia_3_p6h Unk_I_ad VNC_1_p0h VNC_3_la Neuroepi_Pre_p12h
Neur_Dev_1_OL_p6h Neur_TmY5a_p72h PB4_5_I_ad Subperineur_glia_p72h Neur_Dev_2_p3h
NB_I_Pre_OL_p0h LLPC1_ad Tm3_p72h Photoreceptor_p3h perineur_glia_II_ad
Neur_Tm9_p72h Neur_C3_I_ad Tm20_p72h Neur_Tm_p0h Enshea_glia_3_p3h
Glia_90_I_ad Poxn_ad KCab_II_p72h Neur_Dm8Dm11_p6h Neur_15a_p72h
Neur_Tm_p12h Neur_T1_ad Neur_TmY3_p6h L2L3_Neur_ad Neur_Mi15_I_ad
KC_g_p72h Neur_Dm3_II_ad Cortex_glia_1_la Neur_Dev_1_CB_p3h 15b_ad
Capa_p3h Neur_Mi9_I_ad T5_II_ad Neur_Tm20_ad Neur_Mi1_II_ad
Enshea_glia_2_la Enshea_glia_Gliaad KCab_p12h Neur_C2_I_ad PB4_5_p6h
Capa_p6h Neur_C2C3_p12h VNC_1_p3h RNA_31_la Neur_T1_p6h
Neur_T2_I_ad KCab_p0h Neur_Dm8Dm11_p72h RNA_31_p3h Motor_neur_2_la
Neur_Dev_2_la NB_I_Pre_CB_la NB_I_Pre_CB_p12h NB_Generation_la LPC_la
TmY3_p72h NB_I_Pre_OL_la LPC_p12h Surface_glia_p6h Motor_neur_1_p3h
Neur_T2a_p72h Neuroepi_Pre_la NB_I_Pre_CB_p0h Neur_C2_p72h Neur_98_p72h
NB_I_Pre_OL_p12h Neur_Dev_1_OL_p12h Neur_T2a_I_ad Neur_Dev_2_p0h Neur_Lamina_p6h
Neur_Tm4_p72h Enshea_glia_1_p12h Neur_C2C3_p3h KCab_p6h Enshea_glia_1_p3h
Neur_T4T5_p3h Neur_Mi9_II_ad LPC_p0h Neur_Imp_ad Neur_Tm_p6h
Enshea_glia_1_p6h LLPC1_p72h KCg_Neur_ad Neur_Mi1_I_ad RNA_31_p12h
Neur_Mi9_p72h Neur_Pm4_ad PB4_5_p3h Neur_97_I_ad Neur_T1_p3h
NB_I_Pre_OL_p6h Capa_p0h Neur_T2a_II_ad Chiasm_glia_Gliaad Neur_Dm8Dm11_p0h
Motor_neur_1_p6h Neur_C2C3_p6h VNC_1_la KCab_I_Neur_ad Neur_Tm9_I_ad
Capa_la VNC_1_p12h NB_Generation_p3h NB_Generation_p6h VNC_2_p6h
Neur_T3_II_ad Motor_neur_3_p3h KC_g_p12h Neur_Tm3_ad KCab_I_ad
Astro_like_p12h Neur_T3_p72h NB_I_Pre_CB_p3h Neur_Dev_1_CB_la VNC_4_p12h
NB_Generation_p0h KCab_I_p72h VNC_1_p6h Motor_neur_3_p6h T5_p72h
Neur_Dev_1_OL_la Neur_T4T5_p12h Tm3_ad Neur_C3_II_ad Subperineur_glia_ad
VNC_3_p0h Neur_98_I_ad Neur_Tm2_ad Neur_Dev_1_CB_p6h Cortex_glia_1_p6h
L2L3_p72h Neur_26_ad Unk_p72h Photoreceptor_p12h Neur_Pros_p72h
Tm1TmY8_p72h Pm4_ad KCg_ad Neur_T3_I_ad Astro_like_CB_ad
Enshea_glia_p72h Astro_like_p0h NB_I_Pre_OL_p3h 15b_p72h KC_g_p6h
Neur_T2_II_ad Astro_like_la KCab_II_Neur_ad Neur_97_p72h Capa_p12h
Tm4_II_ad 26_ad Neur_98_II_ad Neur_Mi15_72h CB_Pros_ad
Neur_Dm3_p72h Motor_neu_1_la Photoreceptor_p6h Photoreceptor_ad Glia_90_p72h
VNC_4_p3h

Arabidopsis thaliana:
Root_embryo_IV Endodermis_II Endodermis_III Epidermis Root_Unk_II
.. Root_embryo_VI Root_embryo_I . Root_embryo_V
Root_embryo_II Root_embryo_VII Stele_phloem Pre_Cortex_Endo Root_Unk_III
Cortex Root_embryo_III Endodermis_I Stele_xylem Stele_peri
Root_Unk_I

Homo sapiens:
. .. MPP_Hema HSC CD14_Mono_II
Cardiomyocyte Photoreceptor CD8_T_Naive_Hema ECs_Intestine LECs_Intestine
CD4_Memory_PBMC Stromal_Intestine CD8_CM 293T_Low Hepatoblasts
NK_Hema Myeloid_Lung Sympathoblasts Tcell_P_I_TME_BCC Stromal_Lung
CD4_T_Naive_I_Hema Stromal_Heart Jurkat_Low Tcell_P_VI_TME_BCC CD14_Mono_I
Microglia MPAL5R_T1 CD34_GMP_Hema Astro pDC
Schwann_Heart CD8_T_Memo_Hema CD4_N2 CD34_MEP_Hema Stellate_Liver
CD34_Pro_II_Hema Unk_I_Hema MPAL1_T2 T24_High Lymphoid_Myeloid_Pancreas
Cortex_L5-6_II_FEZF2 ENS_glia_Stomach T24_Low CD8_eff_PBMC MPAL3_T2
CD34_Pro_IV_Hema LECs_Lung Adrenocortex Stromal_Muscle Astro_Cerebellum
Antigen_present Stellate_Muscle Cortex_L4-6_III Goblet_Stomach Stromal_Stomach
Cortex_L3-5_III Mesothelial_Intestine IGFBP1_DKK1_pos_cell GMP_Hema PBMC_III_Hema
Sst_CALB1_down VECs_Cerebrum MEP_Hema MCF7_High Early_Eryth
Immune_P_V_BCC SkMC Retinal_pigment MCF7_Low MPAL_PBMC_D11T1
T_Pre_V_BCC Lymphoid_Lung LECs_Heart THP1_Low Cortex_L1-4
VECs_Eye CD34_Pro_III_Hema ENS_neur_Stomach BM_I_Hema HCs_ACs
CD4_T_Memo_II_Hema MPAL_PBMC_D10T1 CD34_Pro_I_Hema MPAL4_T1 T_Pre_III_BCC
STB_vCTB_I Ganglion_cell Oligo Tcell_P_V_TME_BCC Myeloid_Placenta
Stromal_Kidney CD4_Naive_PBMC VECs_Placenta GMP_Neut Immune_P_II_BCC
CD34_PBMC_I_Hema CD34_HSC_Hema MPAL_BMMC_D6T1 Cortex_L5-6_I_FEZF2 Tcell_P_II_TME_BCC
VECs_Heart MPAL2_T1 Cortex_L4-5_I CD14_Mono_PBMC Cortex_L5-6_I_THEMIS
CD34_DC_Hema CLP_II NK_cell_Hema Myeloid_Kidney VECs_Lung
Kidney_Unk_XIV HSC_Hema Sst_CALB1_up Endocardial_cell Astro_Oligo_Cerebrum
Pancreas_Unk_I MPAL4_T2 Tcell_P_VII_TME_BCC Plasma Immune_P_VIII_BCC
Cerebrum_Unk_III T_Pre_II_BCC THP1_High CD34_BM_pDC_Hema VECs_Pancreas
HT1080_High Late_Eryth MPAL_PBMC_D12T2 Jurkat_High T_Pre_I_BCC
Neuroendocrine_Lung CD4_T_Naive_II_Hema B_Pre EAT ELF3_AGBL2_pos_cell
GMP B_Cell_Hema Erythrob_Heart Tcell_P_III_BCC EC_Ciliated
Unk_III_Hema Cortex_L5-6_II_THEMIS T_Pre_VI_BCC K562_High_I T_Pre_IV_BCC
placenta_Lymphoid_cells PAEP_MECOM_pos_cell Inh_neur_Cerebrum ENS_neur_Intestine Myeloid_Heart
HeLa_Low Tcell_P_IV_TME_BCC Astro_Cerebrum MPAL_PBMC_D12T1 Chromaffin_Intestine
Tcell_P_IV_BCC MPAL2_T2 Mesangial_cell Unk_II_Hema PBMC_I_Hema
T_DN_PBMC Purkinje_Cerebellum CD8_EM EC_Thymus MCF10A_High
K562_High_II Intestine_Un_VIII Ductal_cell Mono_Hema MPAL5R_T2
GM12878_Low ENS_glia_Intestine Acinar_cell Immune_P_VII_BCC T_Pre_I_TME_BCC
Megakaryo_Lung Tumor_P_BCC VECs_Spleen Granule_neur CMP_Hema
Immune_P_IV_BCC Cortex_L2-3_I Limbic_neur_Cerebrum NK_PBMC T_Pre_III_TME_BCC
HT1080_Low Tcell_P_III_TME_BCC Megakaryo_Spleen CD4_Th_Hema CD16_Mono_PBMC
Stromal_Pancreas MPAL_BMMC_D5T1 Chromaffin_Adrenal CLP_I Lymphoid_Myeloid_Muscle
Megakaryo_Liver K562_Low BAEC cDC Early_Baso
T_Pre_VII_BCC CD8_Naive_PBMC MPAL5_R1 293T_High Erythrob_Adrenal
GM12878_High PBMC_II_Hema MPAL3_T1 VECs_Thymus Stromal_Eye
Metanephric_cell Lymphoid_Intestine Cortex_L4-6_II EC_Vascular Immune_P_III_BCC
MPAL_PBMC_D12T3 Cortex_L3-5_I Cortex_UpperL Muscle_Unk_VII B_Cell_I_Hema
Myeloid_Intestine ExNeuron_Cerebrum UB_cell EC_Stomach Islet_Endocrine
Thymocytes Schwann_Adrenal CD8_N Chandelier Immune_P_I_BCC
RPC_MG Stromal_Spleen SMCs_Heart OPC CD4_T_Memo_I_Hema
Immune_P_IX_BCC Cortex_L2-6 EVTs SMCs_Placenta HeLa_High
Lymphoid_Heart Stromal_Placenta Tcell_P_II_BCC CD34_BM_Hema MPAL_CD34_D9T1
STB_vCTB_II Basket VECs_Stomach Tcell_P_I_BCC B_Pro_PBMC
Myeloid_Adrenal CD34_Mono_Hema Lymphoid_Liver PBMC_IV_Hema Myeloid_Liver
MPAL_CD34_D8T1 T_Pre_II_TME_BCC Cortex_L2-3_III HSCs_Liver Cortex_Vip
MPAL1_T1 Cortex_L3-5_II Kidney_Unk_VII Erythrob_Liver Cortex_L4-6
Cortex_L2-3_II Eye_Unk_VI CD4_M TGCs_Placenta CD34_CMP_Hema
CD34_MPP_Hema B_Pre_PBMC Parietal_chief_cell SMCs_Muscle VECs_Intestine
DC_Hema T_Reg_Hema MPAL_CD34_D7T1 Immune_P_VI_BCC VECs_Liver
Inh_neur_Cerebellum Schwann_Muscle Myeloid_Spleen BM_pDC_Hema Erythrob_Placenta
MCF10A_Low CD4_N1 SMC_Intestine CMP_LMPP MPAL5_T1


※Disease enhancers annotated by HEDD:


Homo sapiens:
. .. MPP_Hema HSC CD14_Mono_II
Cardiomyocyte Photoreceptor CD8_T_Naive_Hema ECs_Intestine LECs_Intestine
CD4_Memory_PBMC Stromal_Intestine CD8_CM 293T_Low Hepatoblasts
NK_Hema Myeloid_Lung Sympathoblasts Tcell_P_I_TME_BCC Stromal_Lung
CD4_T_Naive_I_Hema Stromal_Heart Jurkat_Low Tcell_P_VI_TME_BCC CD14_Mono_I
Microglia MPAL5R_T1 CD34_GMP_Hema Astro pDC
Schwann_Heart CD8_T_Memo_Hema CD4_N2 CD34_MEP_Hema Stellate_Liver
CD34_Pro_II_Hema Unk_I_Hema MPAL1_T2 T24_High Lymphoid_Myeloid_Pancreas
Cortex_L5-6_II_FEZF2 ENS_glia_Stomach T24_Low CD8_eff_PBMC MPAL3_T2
CD34_Pro_IV_Hema LECs_Lung Adrenocortex Stromal_Muscle Astro_Cerebellum
Antigen_present Stellate_Muscle Cortex_L4-6_III Goblet_Stomach Stromal_Stomach
Cortex_L3-5_III Mesothelial_Intestine IGFBP1_DKK1_pos_cell GMP_Hema PBMC_III_Hema
Sst_CALB1_down VECs_Cerebrum MEP_Hema MCF7_High Early_Eryth
Immune_P_V_BCC SkMC Retinal_pigment MCF7_Low MPAL_PBMC_D11T1
T_Pre_V_BCC Lymphoid_Lung LECs_Heart THP1_Low Cortex_L1-4
VECs_Eye CD34_Pro_III_Hema ENS_neur_Stomach BM_I_Hema HCs_ACs
CD4_T_Memo_II_Hema MPAL_PBMC_D10T1 CD34_Pro_I_Hema MPAL4_T1 T_Pre_III_BCC
STB_vCTB_I Ganglion_cell Oligo Tcell_P_V_TME_BCC Myeloid_Placenta
Stromal_Kidney CD4_Naive_PBMC VECs_Placenta GMP_Neut Immune_P_II_BCC
CD34_PBMC_I_Hema CD34_HSC_Hema MPAL_BMMC_D6T1 Cortex_L5-6_I_FEZF2 Tcell_P_II_TME_BCC
VECs_Heart MPAL2_T1 Cortex_L4-5_I CD14_Mono_PBMC Cortex_L5-6_I_THEMIS
CD34_DC_Hema CLP_II NK_cell_Hema Myeloid_Kidney VECs_Lung
Kidney_Unk_XIV HSC_Hema Sst_CALB1_up Endocardial_cell Astro_Oligo_Cerebrum
Pancreas_Unk_I MPAL4_T2 Tcell_P_VII_TME_BCC Plasma Immune_P_VIII_BCC
Cerebrum_Unk_III T_Pre_II_BCC THP1_High CD34_BM_pDC_Hema VECs_Pancreas
HT1080_High Late_Eryth MPAL_PBMC_D12T2 Jurkat_High T_Pre_I_BCC
Neuroendocrine_Lung CD4_T_Naive_II_Hema B_Pre EAT ELF3_AGBL2_pos_cell
GMP B_Cell_Hema Erythrob_Heart Tcell_P_III_BCC EC_Ciliated
Unk_III_Hema Cortex_L5-6_II_THEMIS T_Pre_VI_BCC K562_High_I T_Pre_IV_BCC
placenta_Lymphoid_cells PAEP_MECOM_pos_cell Inh_neur_Cerebrum ENS_neur_Intestine Myeloid_Heart
HeLa_Low Tcell_P_IV_TME_BCC Astro_Cerebrum MPAL_PBMC_D12T1 Chromaffin_Intestine
Tcell_P_IV_BCC MPAL2_T2 Mesangial_cell Unk_II_Hema PBMC_I_Hema
T_DN_PBMC Purkinje_Cerebellum CD8_EM EC_Thymus MCF10A_High
K562_High_II Intestine_Un_VIII Ductal_cell Mono_Hema MPAL5R_T2
GM12878_Low ENS_glia_Intestine Acinar_cell Immune_P_VII_BCC T_Pre_I_TME_BCC
Megakaryo_Lung Tumor_P_BCC VECs_Spleen Granule_neur CMP_Hema
Immune_P_IV_BCC Cortex_L2-3_I Limbic_neur_Cerebrum NK_PBMC T_Pre_III_TME_BCC
HT1080_Low Tcell_P_III_TME_BCC Megakaryo_Spleen CD4_Th_Hema CD16_Mono_PBMC
Stromal_Pancreas MPAL_BMMC_D5T1 Chromaffin_Adrenal CLP_I Lymphoid_Myeloid_Muscle
Megakaryo_Liver K562_Low BAEC cDC Early_Baso
T_Pre_VII_BCC CD8_Naive_PBMC MPAL5_R1 293T_High Erythrob_Adrenal
GM12878_High PBMC_II_Hema MPAL3_T1 VECs_Thymus Stromal_Eye
Metanephric_cell Lymphoid_Intestine Cortex_L4-6_II EC_Vascular Immune_P_III_BCC
MPAL_PBMC_D12T3 Cortex_L3-5_I Cortex_UpperL Muscle_Unk_VII B_Cell_I_Hema
Myeloid_Intestine ExNeuron_Cerebrum UB_cell EC_Stomach Islet_Endocrine
Thymocytes Schwann_Adrenal CD8_N Chandelier Immune_P_I_BCC
RPC_MG Stromal_Spleen SMCs_Heart OPC CD4_T_Memo_I_Hema
Immune_P_IX_BCC Cortex_L2-6 EVTs SMCs_Placenta HeLa_High
Lymphoid_Heart Stromal_Placenta Tcell_P_II_BCC CD34_BM_Hema MPAL_CD34_D9T1
STB_vCTB_II Basket VECs_Stomach Tcell_P_I_BCC B_Pro_PBMC
Myeloid_Adrenal CD34_Mono_Hema Lymphoid_Liver PBMC_IV_Hema Myeloid_Liver
MPAL_CD34_D8T1 T_Pre_II_TME_BCC Cortex_L2-3_III HSCs_Liver Cortex_Vip
MPAL1_T1 Cortex_L3-5_II Kidney_Unk_VII Erythrob_Liver Cortex_L4-6
Cortex_L2-3_II Eye_Unk_VI CD4_M TGCs_Placenta CD34_CMP_Hema
CD34_MPP_Hema B_Pre_PBMC Parietal_chief_cell SMCs_Muscle VECs_Intestine
DC_Hema T_Reg_Hema MPAL_CD34_D7T1 Immune_P_VI_BCC VECs_Liver
Inh_neur_Cerebellum Schwann_Muscle Myeloid_Spleen BM_pDC_Hema Erythrob_Placenta
MCF10A_Low CD4_N1 SMC_Intestine CMP_LMPP MPAL5_T1